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Name : sgbE (HS_0773) Accession : YP_718983.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 828904 - 829599 bp Length : 696 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTTAGAACAATTAAAGCAAAAAGTATTTGAAGCAAATTTAGCGTTACCTAAATATCATTTAGTGACATTTACTTGGGG TAATGTAAGCGGTATTGATCGTGAAAAAAATCTAGTCGTGATTAAACCTTCCGGAGTGGAATATGAGGTAATGACGCCTG AAGATATGGTAGTTGTGGATTTATTCACAGGTCGAGTAGTGGAGGGCAATAAAAAGCCTTCATCTGATACTGCTACCCAT CTAATACTTTACCGTGAATTTCCAACACTTGGTGGTATCGTTCATACTCATTCTCGTCATGCTACTATATGGGCACAAGC TGGGGAAGATTTGATTGCTGCAGGCACAACCCACGCAGATTATTTTTATGGTGCTATTCCTTGTACACGCAAAATGACAC CTGTAGAAATTCAGGGTGACTATGAACTTGAAACAGGGAAGGTAATTGTAGAAACATTTCGTGTACGAGGGATTGATCCT AAAGATGTGCCTGCGGTATTAGTTCATTCACATGGTCCTTTTGCATGGGGAAATGATCCGGATAATGCCGTACACAATGC TGTTGTTTTAGAAGAGATTGGCTATATGAATTTATTTAGTCGCCAACTTCGTCCTAATTTATCTTCGATGCAACAAGAGT TGCTGGATAAGCATTACTTACGTAAACATGGTAAGAATGCTTATTACGGACAGTAA Protein sequence : MLEQLKQKVFEANLALPKYHLVTFTWGNVSGIDREKNLVVIKPSGVEYEVMTPEDMVVVDLFTGRVVEGNKKPSSDTATH LILYREFPTLGGIVHTHSRHATIWAQAGEDLIAAGTTHADYFYGAIPCTRKMTPVEIQGDYELETGKVIVETFRVRGIDP KDVPAVLVHSHGPFAWGNDPDNAVHNAVVLEEIGYMNLFSRQLRPNLSSMQQELLDKHYLRKHGKNAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 6e-62 | 56 |
