Gene Information

Name : dctP (HS_0701)
Accession : YP_718913.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter, periplasmic component
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1638
EC number : -
Position : 743326 - 744378 bp
Length : 1053 bp
Strand : +
Note : -

DNA sequence : 
TTGCTTTTAGAATATACTTTCAGCAACAGTGCTTTTCCCTTCATATTTTTAATAGGAGAACTTACGATGAAATTTGAAAA
ACTCGCTCTTGCAACTTTAGCGTTGAGTATGTCTGCCTCTGTTTTTGCAGCAGATTATGAGCTGAAATTCGGTATGGTTG
CAGGTACCAGTTCCAATGAGTACAAAGCGGTTGAATTTTTTGCGAAAGAAGTAAAAGAAAAGTCCGGCGGTAAAATTGAA
ATTGCAATTTTCCCAAGTGCACAACTTGGTGATGACCGTACAATGTTAAAACAACTTAAAGACGGTTCTTTAGATTTTAC
ATTAGGTGAAACTGCCCGTTTTCAAATCTTCTTCCCTGAAGCGGAAGTGTTCGCATTGCCTTATATGCTTCCAAACTTTG
AAATCAGTAAAAAAGCATTACTTGAAACCAACTTCGGTAAGGGGTTAATCCAAAAAATTAATAAAGAGTTAAATCTTGAG
TTATTGTCTGTAGCTTACAACGGTACTCGCCAAACTACATCTAATCGTGCAATCAACAGCATTGCAGATATGAAAGGCTT
AAAATTACGTGTACCGAATGCGGCAACTAATTTAGCTTTTGCAAAATATGTAGGTGCTTCTCCGACACCAATGGCATTCT
CGGAAGTGTATTTGGCGTTACAAACCAATGCTGTAGACGGTCAGGAAAACCCATTACCAACTGTCCAAGCACAAAAATTC
TATGAAGTGCAAAAATATTTAGCTTTAACTAACCATATCTTAAATGATCAGCTTTACTTGGCAAGTCGTGAAACTTTAGA
GGATTTACCGGAAGATTTGCAAAAAGTAGTTAAAGAGGCAGCTGAGAACGCAGCAGAGTATCACACTAAATTGTTCAAAG
AGGGTGAAAAAAATTTAGTTGCGTTTTTCAAAGAGAAAGGTGTTACTGTAACTACTCCGGATGTAAAACCGTTCCGTGAT
GCGTTAAAACCTTACTATGATGAATACTTAAATAAAAATGGTGCGTTAGGGAAACAGGCAATCGAAGAAATTTCAACTCT
CATTAAAAAATAA

Protein sequence : 
MLLEYTFSNSAFPFIFLIGELTMKFEKLALATLALSMSASVFAADYELKFGMVAGTSSNEYKAVEFFAKEVKEKSGGKIE
IAIFPSAQLGDDRTMLKQLKDGSLDFTLGETARFQIFFPEAEVFALPYMLPNFEISKKALLETNFGKGLIQKINKELNLE
LLSVAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAFAKYVGASPTPMAFSEVYLALQTNAVDGQENPLPTVQAQKF
YEVQKYLALTNHILNDQLYLASRETLEDLPEDLQKVVKEAAENAAEYHTKLFKEGEKNLVAFFKEKGVTVTTPDVKPFRD
ALKPYYDEYLNKNGALGKQAIEEISTLIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 1e-62 48
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 1e-62 48
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 9e-63 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dctP YP_718913.1 TRAP dicarboxylate transporter, periplasmic component VFG1112 Protein 5e-63 48