Gene Information

Name : xylA (HS_0587)
Accession : YP_718799.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 624797 - 626122 bp
Length : 1326 bp
Strand : +
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
TTGGCTATGTCTAATTATTTTGACAAAATTGCAAAGGTAAATTACGAAGGAGCAAATTCCACTAATCCTTTCGCTTTTAA
ACACTACAATCCAAATGAAGTTATTTTAGGTAAAACAGTAGAGGAACACTTGCGTCTGGCAGTCTGCTATTGGCACACGT
TCTGCTGGACAGGTAACGATATGTTCGGTGCCGGTTCATTGGATCGTAGTTGGCAAAAAACAGGTGATTTGCTGGTTGGT
GCAAAACAAAAAGCAGAAATTGCTTTTGAATTTTTCCAAAAATTAGGTGTGCCTTATTATAGTTTTCACGATGTAGATAT
TGCTCCTGAAAGCAATAATTTCAAAGAATATTTACATAACTTCAATACTATTGTGGATATTTTAGAGAAAAAACAATCAG
AAACTGGTGTGAAGTTGTTATGGGGAACAGCAAACTGCTTTACTAATCCTCGTTATATGTCAGGGGCTTCTACCAACCCT
AATCCGGAAGTATTTGCTTGGGCAGCAGCACAAGTTTTTACTGCAATGAATGCAACTCAACGCTTAGGGGGTGAAAACTA
TGTATTATGGGGCGGACGAGAAGGTTATGAAACATTGCTGAATACCGATCTCAAACGTGAACGTGAACAAATTGGTCGTT
TTATGCAATTAGTGGTAGAACATAAATATAAAATCGGCTTTCAAGGTACATTACTAATTGAACCGAAACCACAAGAGCCA
ACTAAACATCAGTACGATTATGATGTTGCAACAGTTTATGGTTTTTTAAAACAATTCGGATTAGAAAATGAAATTAAAGT
GAATATTGAAGCTAACCATGCAACCTTAGCAGGGCATACATTCCAACATGAAATTGCAACGGCAACTTCATTAGGCATTT
TCGGTTCTATTGATGCTAACCGTGGCGATCCGCAATTAGGCTGGGATACCGACCAATTCCCGAACAGCGTGGAAGAAAAT
ACGTTGGCAATGTATGAAATCCTAAAAGCGGGTGGTTTCACCACAGGCGGTTTTAACTTTGATGCGAAAATTCGTCGCCA
AAGTACCGACCCGTATGATTTATTTCATGCCCATATCGGTGCAATGGATGTGTTAGCTTTGTCGCTCAAACGTGCTGCAA
AAATGATTGAAGACCAAACTTTACAAAAAGTGGTCGATAACCGCTATGCTGGTTGGGATCAAGAGCTGGGTCAGAAAATT
CTAAATGGCAAAGCGAGCTTGGAGGATCTTGCTAAAATAGTAGAAACTCAAGGGTTAGCTCCAAAACCTGTTTCAGGGCA
GCAAGAATATTTAGAAAATTTAGTGAATAGCTATCTTTATCGTTAA

Protein sequence :
MAMSNYFDKIAKVNYEGANSTNPFAFKHYNPNEVILGKTVEEHLRLAVCYWHTFCWTGNDMFGAGSLDRSWQKTGDLLVG
AKQKAEIAFEFFQKLGVPYYSFHDVDIAPESNNFKEYLHNFNTIVDILEKKQSETGVKLLWGTANCFTNPRYMSGASTNP
NPEVFAWAAAQVFTAMNATQRLGGENYVLWGGREGYETLLNTDLKREREQIGRFMQLVVEHKYKIGFQGTLLIEPKPQEP
TKHQYDYDVATVYGFLKQFGLENEIKVNIEANHATLAGHTFQHEIATATSLGIFGSIDANRGDPQLGWDTDQFPNSVEEN
TLAMYEILKAGGFTTGGFNFDAKIRRQSTDPYDLFHAHIGAMDVLALSLKRAAKMIEDQTLQKVVDNRYAGWDQELGQKI
LNGKASLEDLAKIVETQGLAPKPVSGQQEYLENLVNSYLYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 1e-104 51
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 9e-105 51