Gene Information

Name : yfeA (HS_0328)
Accession : YP_718536.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Virulence
Product : chelated iron ABC transporter periplasmic-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 325053 - 325913 bp
Length : 861 bp
Strand : -
Note : -

DNA sequence : 
ATGGGTGTAATCTTAGGTTCTGTATTCAGTTTACCAAGTTACGCAAAATTTAAAGTAGTTACTACTTTTACTGTTATTCA
AGATATCGCTCAGAATGTTGCTGGTGATGCTGCTGTTGTTGAGTCGATCACTGAGCCGGGTGCAGAAATTCATGATTATG
AACCAACTCCACAAGACATCGTAAAAGCACAATCTGCTGATTTGGTGCTTTGGAATGGAATGAATTTAGAGCGTTGGTTC
GAGCGTTTCTTTACCCAAGTGAAGGATAAACCAGCTGTTGTTGTAACTAAAGGGATTGATCCAATTTCTATCTACGAAGG
TCCATACAAAGGTATGCCGAATCCACATGCTTGGATGTCAACCAAAAATGCTTTGGTATACATCGAAAACATTCGTGAAG
CTTTAGTGAAATACGATCCTAAAAATGCAGACACTTACAATGCTAATGCAAAAGCCTATGCAGATAAAATCGTTGCTTTA
GACGCACCATTACGTGCTGAGTTAGAAAAAGTACCAGCTTCACAACGTTGGTTAGTAACCAGTGAAGGTGCATTCAGCTA
CTTAGCTCACGACTACGGTTTCAAAGAGCTTTACTTATGGCCTATCAATGCTGAAGAACAAGGCACACCAAAACAAATCA
AAAATGTAATCAAAAAAGTACGTGAACACAAAATCCCTGTTGTGTTCAGCGAAAGCACCATTTCTGATAAGCCAGCAAAA
CAAGTGGCTAAAGAAACCAATGCAAAATACGGTGGTGTACTTTATGTAGATTCACTTTCTACAAAAGATGGTAAAGTACC
AACTTACATCGACTTATTAAATGTAACTGTTTCGACCATTGTGAATGGTTTCAAAAAATAA

Protein sequence : 
MGVILGSVFSLPSYAKFKVVTTFTVIQDIAQNVAGDAAVVESITEPGAEIHDYEPTPQDIVKAQSADLVLWNGMNLERWF
ERFFTQVKDKPAVVVTKGIDPISIYEGPYKGMPNPHAWMSTKNALVYIENIREALVKYDPKNADTYNANAKAYADKIVAL
DAPLRAELEKVPASQRWLVTSEGAFSYLAHDYGFKELYLWPINAEEQGTPKQIKNVIKKVREHKIPVVFSESTISDKPAK
QVAKETNAKYGGVLYVDSLSTKDGKVPTYIDLLNVTVSTIVNGFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-92 66
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-92 66
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-92 66
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-92 66
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-92 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_718536.1 chelated iron ABC transporter periplasmic-binding protein BAC0439 Protein 3e-99 76
yfeA YP_718536.1 chelated iron ABC transporter periplasmic-binding protein BAC0349 Protein 1e-92 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_718536.1 chelated iron ABC transporter periplasmic-binding protein VFG0525 Protein 1e-92 66