Gene Information

Name : yfeB (HS_0327)
Accession : YP_718535.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 324285 - 325043 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACTCACATCAGCTCTCTTTCTGTCAGAGATATTACGGTTCGTTATAGTAATGGTCATACGGCGTTGCACGATGT
GAGTTTCCACCTTGAAGGTGGTACGATTTGTGCATTGCTCGGTATTAACGGAAGTGGAAAATCGACTTTATTCAAAAGCA
TTATGGGCTTAGTGAAGCCTCAAGGTTCAATTGAAATTTGTAACATGCCCGCTAATCGGGCATTAAAACAAAACTTAATT
GCCTATGTACCGCAAAGTGAAGAAGTGGATTGGCAGTTCCCCGTTTCTGTTTATGACGTTGTAATGATGGGGCGTTATGG
TTATATGAATTTCTTTCGTATGCCTAAAGCACAAGACAAGAAAAAAGTTTTAGACGCAATGGAGCGAGTCAATATTGCTC
ATTTGCGAGATCGACAAATCGGCGAGCTTTCTGGAGGGCAAAAAAAACGAGTATTTCTTGCTCGTGCATTAGCACAAGAA
AGCCAAATCATTTTATTAGATGAACCTTTTACTGGTGTAGATGTTGGCACAGAAAATGCCATCATTGCGTTACTCAAACA
GCTTCGTCAGGAAGGTCATCTCGTTCTCGTTTCAACGCATAATCTTAGCACCGTGCCAAGTTTTTGCGATCAAGCGGTGA
TGATCAACCGTACACTACTCGCTGCAGGATCAATCGAAAGCACTTTTACTCAAGAAAATTTAGCTCGTGTGTTTGGCGGC
GTTTTACGTTATCAACATTTTATTCAAGATGCGGAGTAA

Protein sequence : 
MKTHISSLSVRDITVRYSNGHTALHDVSFHLEGGTICALLGINGSGKSTLFKSIMGLVKPQGSIEICNMPANRALKQNLI
AYVPQSEEVDWQFPVSVYDVVMMGRYGYMNFFRMPKAQDKKKVLDAMERVNIAHLRDRQIGELSGGQKKRVFLARALAQE
SQIILLDEPFTGVDVGTENAIIALLKQLRQEGHLVLVSTHNLSTVPSFCDQAVMINRTLLAAGSIESTFTQENLARVFGG
VLRYQHFIQDAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-70 64
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-70 63
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-69 63
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-69 63
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-70 63
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 5e-42 41
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 4e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_718535.1 iron ABC transporter ATP-binding protein BAC0440 Protein 1e-80 69
yfeB YP_718535.1 iron ABC transporter ATP-binding protein BAC0350 Protein 1e-70 63
yfeB YP_718535.1 iron ABC transporter ATP-binding protein BAC0400 Protein 8e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_718535.1 iron ABC transporter ATP-binding protein VFG0526 Protein 1e-70 63