Gene Information

Name : lspA (HS_0185)
Accession : YP_718392.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 166327 - 166824 bp
Length : 498 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGAATTTATCAAAAACAGGACTTCCATTTCTTTGGATAAGTGCGGTTGCTTTTTTTACTGATTTAATAACAAAACTCGC
TGTAGTAAAAAATTTTTCTTTATACGAAAGTATTAATATATTGCCTTTCTTTAATTTAACTTACGTGCGTAATCACGGGG
CAGCCTTTAGCTTTTTGGCTGACCATGCAGGTTGGCAAAAATACTTTTTTATTTTATTGGCTTTAGTCGTTTCCTTCATG
ATTTTATTTTTCTTATATAAAAATCAAGCAACACAAAAACTACAAAATACAGGCTATGCGTTAATGGTTGGTGGAGCTTT
GGCAAACGCAGCCGATAGAGCTTATCATGGCTTTGTGGTAGATTTTTTTGATTTTTATTGGCAACAATGGCATTACCCCG
TATTTAATATCGCTGATGTTGCAATTTGTATTGGTGCCGGATTATTGGCTATTGATGCTTTTAAGCAAAACGATAAAAAA
GAGAGCAAGCAGAACTAA

Protein sequence :
MNLSKTGLPFLWISAVAFFTDLITKLAVVKNFSLYESINILPFFNLTYVRNHGAAFSFLADHAGWQKYFFILLALVVSFM
ILFFLYKNQATQKLQNTGYALMVGGALANAADRAYHGFVVDFFDFYWQQWHYPVFNIADVAICIGAGLLAIDAFKQNDKK
ESKQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 6e-23 45
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 6e-23 45
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 4e-23 45
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 4e-23 45
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 4e-23 45
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 4e-18 41