Gene Information

Name : HS_1775 (HS_1775)
Accession : YP_719980.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1995333 - 1996259 bp
Length : 927 bp
Strand : -
Note : -

DNA sequence :
GTGATACAAAAATACCCTCAAAAACTGACCGCACTTTGTACTGCACTGACCTTTGCCACAACGGTACAAGGTGAGATTAA
TACGGCAACCATTATGGCATCAAGTGCTTCAACCGGTTGTTTAGACTACAAAGTGGTTGGCACCTGTTTTTGGCTTTTCT
GTACTTATTTCGGTTGTAAGGTTAGAACCTCAACCAAAGTACGCCACTTTTTACCGGAAATGGTCGTATCTGCCTATAAC
CACGATGGGCAAAACCCGTGGTCGGAAATGAATGTGGTAACTCAAGGGGTCAAAGGCGGTGAGTATCGCTCCCCACAAAA
AAATTATAGCCAACTTACTTTCAAAAATGCCACCGCACTTGGTCATCCTCAAGGGGCGATTGGCAACTTGTTAAAAAGTA
CAGGCTATTATTGCCAAACTCAGACAACCCCATTTATGCCGTATTTTTTAAGCAGTTTAGACTATTTTGCTTGGCAACAA
AATTTGCCCGAGATGTTTTACCCCGAAGCACTCACACCGGGAATGCGTGAGGTGCGTTCAGAGTTGGAGATGTGGGGAAA
TATATTTCCTCGCAGTGGTGCGGTAACACAAGTTGATGATTATAAGGCATCCGCCGTTATTGCACAGCGTGTTGCTGACA
TTGTTACCCGCACCGGACAAGTCCATATTTATCAACCTGTGGCTAGAACAGGCGGTGCGGGGACTTGGTATCCAAAGCCT
GTCAAAGAAGGCAATGCCAATAATCATAAATGGCAACAACTTTTCCCCGAGATGCAACAATCTTGCAGTGCATTCCCTGA
TACGCCACCGACAATGTTATCTGAAAAAGGCAATTATGCCTGGGCGTTATGGCGTCCTTATAAATGCTGTAAACGTCGCG
GGCAAACCTTTTTATACAGTATTGATTGGTCTAACGATAACGAATAA

Protein sequence :
MIQKYPQKLTALCTALTFATTVQGEINTATIMASSASTGCLDYKVVGTCFWLFCTYFGCKVRTSTKVRHFLPEMVVSAYN
HDGQNPWSEMNVVTQGVKGGEYRSPQKNYSQLTFKNATALGHPQGAIGNLLKSTGYYCQTQTTPFMPYFLSSLDYFAWQQ
NLPEMFYPEALTPGMREVRSELEMWGNIFPRSGAVTQVDDYKASAVIAQRVADIVTRTGQVHIYQPVARTGGAGTWYPKP
VKEGNANNHKWQQLFPEMQQSCSAFPDTPPTMLSEKGNYAWALWRPYKCCKRRGQTFLYSIDWSNDNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-100 72
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 2e-70 51
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 2e-70 51
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 6e-72 51
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-68 50
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 5e-60 50
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-72 49
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 3e-66 48
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 2e-66 48
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 3e-55 47
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-65 47
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 4e-65 47
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-65 47
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 3e-51 45