Gene Information

Name : ssb (HS_1729)
Accession : YP_719934.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Unknown
Product : single-stranded DNA binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1961745 - 1962194 bp
Length : 450 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCGGTATTAATAAAGTGATTATTGTCGGGAATCTTGGTGCAGATCCAGAAGTGAGAACAATGCCAAATGGCGAAGC
GGTTTCCAATATTAGTGTAGCAACCAGCGAAAGTTGGACAGATAAAACGACAGGTGAGAAACGTGAATTAACGGAATGGC
ATCGGATTGTGTTTTATCGTCGTCAAGCTGAGATTGTCGGAGAATATTTACGCAAAGGCTCGAAAGTCTATGTTGAAGGA
CGTCTAAAAACCCGTAAATGGCAAGATCAAAATGGGCAAGATCGTTATACCACTGAAATTCAAGGCGATGTATTACAGAT
GTTAGATAGTCGGAATGTAGCCAATAGCGTTGAGGGACAGGCTAGTTACCAAGCTACTAATCAATCTGCAAAAACGATGA
CTCAACAAGAGTTACCGCCTGATAATTTTGATGACGATATTCCATTCTGA

Protein sequence : 
MAGINKVIIVGNLGADPEVRTMPNGEAVSNISVATSESWTDKTTGEKRELTEWHRIVFYRRQAEIVGEYLRKGSKVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVLQMLDSRNVANSVEGQASYQATNQSAKTMTQQELPPDNFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 3e-55 80
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-35 56
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-35 56
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-35 56
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 9e-27 46