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Name : hslU (HS_1542) Accession : YP_719747.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1739036 - 1740367 bp Length : 1332 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTGAAATGACCCCTCGTGAAATTGTTTCTGAATTAGATCAACATATCATTGGACAAGCTGATGCCAAAAGAGCGGT TGCTATTGCCTTAAGAAATCGCTGGCGTAGAATGCAACTACAAGAACCCTTACGCCATGAAGTCACCCCAAAAAATATTT TAATGATAGGACCTACCGGCGTAGGTAAAACAGAAATCGCCCGCCGTCTGGCTAAATTAGCTAATGCACCATTTATCAAA GTTGAAGCAACAAAATTTACCGAAGTAGGCTATGTCGGTAAAGAAGTTGATTCAATTATCCGTGACTTAACAGATAGTGC CATGAAACTTGTACGTCAAACAGAAATTGAAAAAAATCGTTTTCGTGCTGAAGAAATGGCGGAAGAGCGAGTTTTAGATA CCCTATTACCCCCAGCGAAAGATCAATGGGGACAAATTGAAGAACGAGATACCAATACCAACACACGCCAAATTTTTCGC AAGAAATTACGTGAGGGGCAATTGGACGATCGTGAAATTGAAATTGACATTGCCGCACCAAATATCGGCGTTGAAATTAT GGCACCTCCCGGTATGGAAGAAATGACCAATCAATTGCAATCAATGTTCCAGAATTTATCTTCCGGTCAAACTAAAAAAC GCAAAATGAAAATCAAAGATGCGTTAAAAGCATTAATTGATGACGAGGCGGCAAAACTAATTAATCCTGAAGAATTAAAA CAAAAAGCCATTGATGCCGTTGAACAAAATGGAATTGTCTTTATTGACGAAATTGACAAAATCTGCAAAAAAGGCGAATA CAGCGGTGCTGATGTATCTCGTGAAGGCGTACAACGAGATCTATTGCCATTAGTGGAAGGCTCAACAGTCAATACCAAAC ACGGTATGGTAAAAACCGATCACATTTTATTTATTGCATCAGGGGCATTCCAAGTTGCTCGCCCGTCAGATTTAATTCCC GAATTACAAGGGCGTTTACCTATTCGTGTCGAACTTTCCGCATTAACTGCCAAGGATTTTGAACGAATTTTAACTGAACC TAATGCGTCCCTAACCGAACAATATCAAGCACTGATGGCAACCGAAGGGGTTGATATTGAATTTACTGAAAGTGCGGTGA AAAAAATCGCTGAAGCAGCCTTTAGGGTCAATGAAAAAACAGAGAACATCGGAGCTCGCCGTTTACATACTGTTATGGAA CGCTTAATGGATAAGATCTCTTTTGATGCCAGTGAAATGAGCGGTCAAAACGTCATAATTAACGGTGATTACGTTACCGG AGCATTAGGTGATGTCGTAGAGAACGAAGATTTAAGCCACTTTATTCTATAA Protein sequence : MSEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK VEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQTEIEKNRFRAEEMAEERVLDTLLPPAKDQWGQIEERDTNTNTRQIFR KKLREGQLDDREIEIDIAAPNIGVEIMAPPGMEEMTNQLQSMFQNLSSGQTKKRKMKIKDALKALIDDEAAKLINPEELK QKAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVNTKHGMVKTDHILFIASGAFQVARPSDLIP ELQGRLPIRVELSALTAKDFERILTEPNASLTEQYQALMATEGVDIEFTESAVKKIAEAAFRVNEKTENIGARRLHTVME RLMDKISFDASEMSGQNVIINGDYVTGALGDVVENEDLSHFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-101 | 48 |
