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Name : HS_1425 (HS_1425) Accession : YP_719637.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 1609525 - 1610766 bp Length : 1242 bp Strand : - Note : - DNA sequence : ATGGCTAGACAAATCATACAGTTAACTAATACTAAAATTTTAAACGCTAAGCCTAAAGATAAAGATTATACGTTATCTGA TGGGCAAGGTCTCTATTTATTAGTTAAATCAAACGGTTCTAAATTATGGCGATTTAATTATTATGATTTACTTAAAAAAC GTAAATTAATTTCATTGGGAAGTTATCCTGAAACCTCATTACTCGATGCTCGTACTAAACGTGATGAATATCGTGCGTTA CTGGCTAAAGATATAGAGCCGCAGGATTACATTTTTAAGCAGAAAGAACAAGCAATTTTTAATCAATGCAATACGTTGAT TGGTGTAGCTAAAGATTGGCGTGAAATGAAATCAAGCAAAGTTGAAGCTGATACAATGAAAGATCAGTGGAGATTGTTGG AATTGCACTTATTCCCTCATTTAGGAAATATGCCTATATCTGATATTACAGCACCTTTCACAAGGATGAAATTGCAAAAA TTAGCTGATGATAAAAAATTTGAAATGCTAAAAAAAGTTATTCGTGGGCTTAATGAAATTATGCGTTTTGCCGTAAATGC TGGCTTGATCCAATTTAACCCGACTGCAAATCTTCAAGAGTTATTCCCTAGCGGAGAGGTCCAGCATCGTCCATCTATCC ATCCAGATAAACTACCCAAATTTTTAGAATCCGTAAATAAAGCAAATATTCAGCTACAAACTCGTTGCTTGCTGGAATGG CAATTATTGACGATGGTTAGACCAAGTGAAGCTGCTGGAACTATGTGGCGAGAAATTGATTTTGAGAATAAAACTTGGCT TATTCCAAAAGATCGTATGAAAGGGAAAAAGCGATCTCATTTAGTTCCTTTATCCCAGCAAGCAATAAACATACTGAACA TAATGCGTCCAATAACGGGAAATTGTGATTTTGTCTTCCCTAAAAATGGAGATCTTACAACAAATATGAGCAGCGAAACT ATTAATAAAGCATTGCGAAAAATGGGCTACCAAGGAATTTTATGTGCACATGGATTTAGATCTATCGCTAGCACAGCATT AAATGAGAATGAATTTAACGTAGAAATTATTGAGGCTTTGCTTTCGCATGTTAAAGGCGACAAAGTGCGTACAGCTTATG ACCGCAGCACATACGAAAAGCAAAAGCGACAATATATTGAATGGTGGGGGAATTTTGTTGAAAAATCCTCAGTGAGACCT TGTTTACTCGGGGCGGGCGGATTGGATTTGCTCAATCCATAA Protein sequence : MARQIIQLTNTKILNAKPKDKDYTLSDGQGLYLLVKSNGSKLWRFNYYDLLKKRKLISLGSYPETSLLDARTKRDEYRAL LAKDIEPQDYIFKQKEQAIFNQCNTLIGVAKDWREMKSSKVEADTMKDQWRLLELHLFPHLGNMPISDITAPFTRMKLQK LADDKKFEMLKKVIRGLNEIMRFAVNAGLIQFNPTANLQELFPSGEVQHRPSIHPDKLPKFLESVNKANIQLQTRCLLEW QLLTMVRPSEAAGTMWREIDFENKTWLIPKDRMKGKKRSHLVPLSQQAINILNIMRPITGNCDFVFPKNGDLTTNMSSET INKALRKMGYQGILCAHGFRSIASTALNENEFNVEIIEALLSHVKGDKVRTAYDRSTYEKQKRQYIEWWGNFVEKSSVRP CLLGAGGLDLLNP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 7e-85 | 43 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-76 | 42 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-76 | 42 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-77 | 42 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 2e-80 | 41 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 2e-80 | 41 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-80 | 41 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-80 | 41 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 2e-80 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HS_1425 | YP_719637.1 | integrase | VFG1092 | Protein | 7e-77 | 42 |
