Gene Information

Name : HS_1424 (HS_1424)
Accession : YP_719636.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1609378 - 1609563 bp
Length : 186 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAGAATATTAAGAATAAAAGATGTATGTCAAAAAACAGGCTTACCGAGATCGACAATTTATGCAAGAATAAAACA
AGGCACTTTCCCAGCACAGCTAAAATTAGGTGCTCGATCTTCAGGCTGGAAGGAAAGTGAATTAGATTTATGGATTGAGC
AAATCCAATCCGCCCGCCCCGAGTAA

Protein sequence : 
MERILRIKDVCQKTGLPRSTIYARIKQGTFPAQLKLGARSSGWKESELDLWIEQIQSARPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 4e-08 50
unnamed CAA21398.1 - Not tested HPI Protein 6e-08 50
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 1e-08 48
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 3e-06 47
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-06 46
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 5e-09 46
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 8e-09 46
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 8e-09 46
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 3e-08 45
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 4e-08 41
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 6e-08 41
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 6e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HS_1424 YP_719636.1 phage transcriptional regulator, AlpA VFG1118 Protein 2e-09 46
HS_1424 YP_719636.1 phage transcriptional regulator, AlpA VFG1141 Protein 2e-08 41