|
Name : int (HS_1337) Accession : YP_719549.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : - COG ID : - EC number : - Position : 1528094 - 1529350 bp Length : 1257 bp Strand : - Note : - DNA sequence : ATGACACGTCCTACCAATTTACTGAATAATCGAAAGATAGATGCTGCCAAACCAAAAGCCGATGAACAAGGCAATTTAAC CGATAATAAACTTCAAGATGGTAACGGCTTATACCTGCTGGTTAAAGCAACTGGTTCTAAATTATGGCGGTTTAACTATT ACAAACCGCTTACCAAAAAACGCACAGAAATGAGTTTAGGAGCTTATCCCGATGTTTCACTAGCTCAAGCGAGAGAATTA AGAAATCAGTATCGCAGTTTACTAGCTCAAGATATTGATCCGAATGAACACCGCCAAAATGTTAAACAAGCCAAGTTAGA CGAAATCAATAACACCTATGAGGCAGTAGCGTGGGCGTGGTTCGAGTATCGCCAAACGAAAAAGAACTTTTCTGAAGGAT ATAAAAAAGATGTAGCAAGCCTGATAAAACGTTGCTTATTGCCACATTTTGGCAGTTTACCGATTAGCCAAATTACCGCC CCAATGGCGTTAAAAGCCTTTAAGCAGTATCAAGATGAAGGAACACTTGAGAAACTCAAACGCACAATTCAAAAGCATAA CGAAATTATGAATTTTGCTTTACATAGAGATTTAATTTCTTTTAATCCTACTGCCAATATATCTAAAGAGTTTGATAGTC CAACAGTTGAGCATTTCAAAACAATTCAACCTGAAGATTTACCCGAATTTATGTACACGCTCAATAACGCCCAAATCAAT TTACGCACACGTTATTTAATTTTATGGCAATTACTGACAATGACACGCCCAAATGAAGCAGCCAAAGCACGTTATGAAGA TATAGACGAAAAAAGCCGTTTATGGACTATTCCAGCGGAAAATATGAAACGGGGGATTGCTCATAAAATCACATTATCAA GGCAAGCAATGGCACTTTTACGAGAGATTAAAAAACTTAGTGGTGGTAAAACTTATCTTTTCCCGAATGTGAAATATCCA CAAACTCACGTCAACACACAAACAGCAAACGCAGCGATTAAGAGAATGGGCTATCAAGGAAAGTTAGTGGCTCACGGTTT GCGTTCGATTGCTAGCACCTATCTAAATGAAAAAGGCTATAACAGCGAATTGATAGAAGTAGCCTTATCGCATATAAACA GCGACCGCATTAAAGCCGCTTACGATAGAGGCGAACGCCTAGAGCAGCGTTTTAAACTGCTTCAAGTGTGGGCGGATTTT GTTGAAGAATGTTCACAGGGAGCATTGCCGCAATATCATCTAAAAAGGGTGGCGTAG Protein sequence : MTRPTNLLNNRKIDAAKPKADEQGNLTDNKLQDGNGLYLLVKATGSKLWRFNYYKPLTKKRTEMSLGAYPDVSLAQAREL RNQYRSLLAQDIDPNEHRQNVKQAKLDEINNTYEAVAWAWFEYRQTKKNFSEGYKKDVASLIKRCLLPHFGSLPISQITA PMALKAFKQYQDEGTLEKLKRTIQKHNEIMNFALHRDLISFNPTANISKEFDSPTVEHFKTIQPEDLPEFMYTLNNAQIN LRTRYLILWQLLTMTRPNEAAKARYEDIDEKSRLWTIPAENMKRGIAHKITLSRQAMALLREIKKLSGGKTYLFPNVKYP QTHVNTQTANAAIKRMGYQGKLVAHGLRSIASTYLNEKGYNSELIEVALSHINSDRIKAAYDRGERLEQRFKLLQVWADF VEECSQGALPQYHLKRVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 3e-72 | 44 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 2e-75 | 41 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 2e-75 | 41 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-75 | 41 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-75 | 41 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 2e-75 | 41 |
