Gene Information

Name : rph (HS_1292)
Accession : YP_719504.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1480384 - 1481100 bp
Length : 717 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCAAATGCGAGAGCAATCAATCAACCCCGTCCAATAAAAATTACTCGTCATTACACTAAACATGCTGAAGGTTC
GGTATTAGTTGAATTCGGTGAAACTAAAGTGATTTGTACAGCGACGGTTGAAGATAGTGTACCACGTTTTTTAAAAGGGC
AAGGAAAAGGTTGGGTTACTGCAGAATATGGTATGCTTCCACGCTCAACCCATAGCCGTATGCAACGTGAAGCGGCTAAG
GGTAAACAAGGCGGTAGAACGATGGAAATTCAACGTTTAATTGCACGCTCATTACGTGCTATGGTAGATTTGGAAGCTTT
AGGTGAGCGTGCAATCACATTGGACTGCGATGTTATTCAAGCGGACGGAGGTACGAGAACAGCATCAATCACGGGGGCTT
GTGTAGCTTTAATTGATGCAATTAATTTTTTGCTGAAAAACGGTACGTTGACAACTAATCCGATAAAGGGATTAGTTGCC
GCCATTTCCGTTGGTATTGTCAACGGTGAAACGGTGTGTGATTTAGAATATGTGGAAGATAGCATTGCCGAAACAGATAT
GAATGTGGTGATGATGGAAGATGGCCGTATGATTGAAGTACAAGGAACAGCAGAGGGTGAACCGTTTAGCCATGCAGAAC
TTCTTACCCTATTAGATTTAGCCAAACAAGGTTGTGAACAACTTTTTGTGGCACAACGTGTTGCATTAGCGGAATAA

Protein sequence :
MRPNARAINQPRPIKITRHYTKHAEGSVLVEFGETKVICTATVEDSVPRFLKGQGKGWVTAEYGMLPRSTHSRMQREAAK
GKQGGRTMEIQRLIARSLRAMVDLEALGERAITLDCDVIQADGGTRTASITGACVALIDAINFLLKNGTLTTNPIKGLVA
AISVGIVNGETVCDLEYVEDSIAETDMNVVMMEDGRMIEVQGTAEGEPFSHAELLTLLDLAKQGCEQLFVAQRVALAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-62 57