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Name : potB (HS_1158) Accession : YP_719370.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1308543 - 1309403 bp Length : 861 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAAGATGAACAGTAATAAATTTCAAAACTTAACTGTTAGTGTCATTTTCGGCTGGTTACTCTTCTTTGTTTTAGTACC AAACCTGCTAGTCTTAACAGTTAGTTTTTTATCAAAAGATAGCAGTAATTTTTATGCTTTGCCTTTTAGCTTGGAAAGTT ACGCAAACTTAGTTGACTCACATTACGCCAAAGTAATGTGGAATTCACTCCGTATGTCTGCGATTGCAACTGTTATCTGT TTACTTGTAGGTTATCCTTTTGCATTTTTCATTGCCAAAATAAAACCCTCATACCGTCCATTTTTGCTATTCCTCGTTGT TTTACCTTTTTGGACGAATTCGTTAATTCGTATTTACGGAATGAAAATCTTTCTTGGTATGAAAGGTATTTTAAACAATA CCCTAATTGCAATCGGTATTATTGACACGCCAATTCGTATCTTGAATACCGAAACTGCGGTAATCATTGGATTAGTTTAC ATCTTACTGCCTTTTATGATTTTACCGCTTTACGCTGCCATTGAAAAACTGGATCTTCGTTTATTAGAAGCGGCAAAAGA TTTGGGAGCGAATTCATTCCAACGTTTTATTAGAATCATTATTCCATTAACAATGCCGGGAATTATCGCAGGTTGTTTGT TAGTTCTATTACCCGCAATGGGAATGTTCTATGTGTCAGATTTGCTTGGCGGTGCGAAAGCAGCCCTAGTAGGTAATGAA ATTTATGTCCAATTCTTAAAAATAAGAAACTGGCCTATGGGTTCAGCAATTAGTATAGCACTTACTCTACTAATGGCTTT ATTAATTTTTATTTACTATAAAACAAGTAAATTATTAAATAAAAAAATGGAGTTGGAATAA Protein sequence : MKMNSNKFQNLTVSVIFGWLLFFVLVPNLLVLTVSFLSKDSSNFYALPFSLESYANLVDSHYAKVMWNSLRMSAIATVIC LLVGYPFAFFIAKIKPSYRPFLLFLVVLPFWTNSLIRIYGMKIFLGMKGILNNTLIAIGIIDTPIRILNTETAVIIGLVY ILLPFMILPLYAAIEKLDLRLLEAAKDLGANSFQRFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLGGAKAALVGNE IYVQFLKIRNWPMGSAISIALTLLMALLIFIYYKTSKLLNKKMELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 4e-70 | 62 |
