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Name : serS (HS_1075) Accession : YP_719287.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1191644 - 1192933 bp Length : 1290 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATTGATCCAACTTTATTACGCAATAATCTTTCTGAAATTGCGGAAAAATTAAAAGTAAGACGTGGCTTTATTCTCGA CGTAAATAAATTTTCACAATTAGAAGAACAACGTAAGACTTTACAAATTAAAACGGAAACTTTACAAGCCGAACGTAACT CTCGCTCAAAAACAATTGGTGCGGCAAAAGCCAGAGGAGAAGATATTTCTACTTTATTGGCAGAAGTTGATCATATGGGA GCCGAATTAAATACTGTCAAAGAAGAATTAGCGAATGTATTAACGGAAATTGAGCAATTGGCATTAACAATTCCCAATAT TCCTGCTGATGAAGTACCTTTAGGAAAAGATGATTCTGATAATAAAGAAGTTTTTCGTTGGGGAACACCAAAAAAATTTG ATTTTGAAGTGAAAGATCATGTTGCCTTAGGGGAAATATTAGGTGGGTTAGATTTTGCTGCTGGTGTTAAATTAAGTGGT GCTCGTTTTGCCGTAATAAAAGGGCAAATTGCAAGAATGCATCGAGCCTTGGCACAGTTTATGCTAGATTTACATACTGA GCAACATGGCTATACAGAGGCTTATGTACCTTATTTAGTCAATCATGCAACACTTTATGGAACGGGGCAGTTACCAAAAT TTGGTGAGGAGTTATTTCATATAAAACCCCTAGAAAATGAACAGACTTATGCGTTAATCCCTACCGCCGAAGTGCCTGTA ACAAACTTAGTTCGAGATGAAATCATCGATGAAGCTGATTTACCAATAAAAATGACCGCACATACGCCTTGTTTCCGTTC TGAAGCAGGTTCTTACGGTCGTGATACTCGAGGTTTAATCCGTATGCATCAATTTGATAAGGTTGAATTAGTACAAATTG TTGAACCGGAAAAATCAATGGAAGCACTGGAAGAATTGACAAATCAGGCAGAAAAAGTATTACAACTTTTAAATTTACCT TATCGTAAAGTTTTATTGTGTACAGGCGACATGGGATTCGGAGCTACTAAAACATATGATTTGGAAGTATGGATTCCGGC ACAAAATACGTATCGTGAAATTTCTTCTTGCTCAAATATGTGGGATTTCCAAGCACGTCGTATGCAAGCCCGTTGTCGTG CAAAAGGCGATAAAAAAACACGCTTAGTACATACTTTAAATGGATCGGGACTAGCTGTTGGTCGCACTTTAGTTGCCATT CTTGAAAATTATCAAAATGCAGATGGCTCTATTACCGTACCGGAAGTATTACGCCCTTATATGAATGGAATAGAAATTAT TGGTAAATAA Protein sequence : MIDPTLLRNNLSEIAEKLKVRRGFILDVNKFSQLEEQRKTLQIKTETLQAERNSRSKTIGAAKARGEDISTLLAEVDHMG AELNTVKEELANVLTEIEQLALTIPNIPADEVPLGKDDSDNKEVFRWGTPKKFDFEVKDHVALGEILGGLDFAAGVKLSG ARFAVIKGQIARMHRALAQFMLDLHTEQHGYTEAYVPYLVNHATLYGTGQLPKFGEELFHIKPLENEQTYALIPTAEVPV TNLVRDEIIDEADLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVEPEKSMEALEELTNQAEKVLQLLNLP YRKVLLCTGDMGFGATKTYDLEVWIPAQNTYREISSCSNMWDFQARRMQARCRAKGDKKTRLVHTLNGSGLAVGRTLVAI LENYQNADGSITVPEVLRPYMNGIEIIGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-108 | 56 |
