Gene Information

Name : ribD (HS_1050)
Accession : YP_719262.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Unknown
Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1157428 - 1158558 bp
Length : 1131 bp
Strand : -
Note : -

DNA sequence :
ATGCAACCAACATTTTCAGCTCAAGACGAATATTTTATGCAGATAGCTTTAGAACTTGCGAAAAAAGGCATATTTACCAC
AACACCTAATCCTGCTGTGGGCTGTGTTTTAGTCAAAAATGGTGAAATTGTTGGGAGAGGTTTTCATTTTAAAGCGGGGC
AACCCCATGCGGAAGTTATGGCATTACGTGATGCCGGTGATAGAGCAAAGGGGGCAACTGCTTATGTGACTTTAGAGCCT
TGTTCTCATTTCGGAAGAACGCCTCCTTGTGCACAAGGACTAATTGAAGCAGGTATTCGCAACGTTATTGTGGCAATGAA
AGATCCTAATCCGCAAGTTGCAGGCAAAGGGTTAGCTATGTTGCAAGCAGCAGGTATTGAAAGTGCGGTAGGATTATTAC
AAGAAAAAGCGGAATTATTAAACAAAGGTTTTTTAACACGAATGAGAACACAGAAACCTTTTGTTATTTTGAAAATGGCA
ATAAGCCTTGACGGTCGAACTGCTATGGCTAATGGCGAGAGTAAATGGATTAGCGGAGAACAGGCACGGCAAGACGTACA
GCAAGAGCGGGCTAAAGTTTCTGCAATTTTATCGACAGCTAAGACGGTGTTAGCCGATGATCCCTTGTTAAATCTTCGTT
GGGAGCAATTTCCATCGGAATTACAACAAAATTATAAAGTTGAAGAAGTGCGTCAACCTGTCAGAATTATTCTTGATCGT
CTGCATCTTGTGACACCTCGTCATAAATTATTTCAATGTCAATCTCCCGTTTGGCTGGTGGGTGATAAAGAGCGTGATAT
GTCAGCGTTTCCTGATTATTGTCAATATATAAAATTATTCCCAAGTAACGAGCATTCTTATTTGGAAAACTTGTTGATTG
AATTGGCAAAGCGTCAGATTAATAGTCTTTGGTTAGAAGCGGGAGAAACTTTAGCCGGTGCATTTATTGAGGAAAATTTA
GTGAATGAGCTCATTATTTATATGGCACCAAAATTACTGGGTAATGAAGCTCGTGGTTTTTGCCATTTGCCACATTTGAA
GCGTTTAGCCGATGCACCAAAGTGGCAATTGTTATCTTTGGCACAAATTGGCGAAGACATTAAGTTGAATTATCAGCGTC
ACATTTTATGA

Protein sequence :
MQPTFSAQDEYFMQIALELAKKGIFTTTPNPAVGCVLVKNGEIVGRGFHFKAGQPHAEVMALRDAGDRAKGATAYVTLEP
CSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGLAMLQAAGIESAVGLLQEKAELLNKGFLTRMRTQKPFVILKMA
ISLDGRTAMANGESKWISGEQARQDVQQERAKVSAILSTAKTVLADDPLLNLRWEQFPSELQQNYKVEEVRQPVRIILDR
LHLVTPRHKLFQCQSPVWLVGDKERDMSAFPDYCQYIKLFPSNEHSYLENLLIELAKRQINSLWLEAGETLAGAFIEENL
VNELIIYMAPKLLGNEARGFCHLPHLKRLADAPKWQLLSLAQIGEDIKLNYQRHIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-66 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-66 48