Gene Information

Name : HS_1014 (HS_1014)
Accession : YP_719225.1
Strain : Haemophilus somnus 129PT
Genome accession: NC_008309
Putative virulence/resistance : Unknown
Product : permease
Function : -
COG functional category : R : General function prediction only
COG ID : COG2056
EC number : -
Position : 1118086 - 1119444 bp
Length : 1359 bp
Strand : +
Note : -

DNA sequence :
ATGATATTAACTAACCCAGTAGTAATTTCCATTATTGTGTTACTCGCCTTAAGTCTTATGCGAATTAATGTTGTTATGGG
ATTAGTTATCTCAGCATTAGTTGCCGGGCTATGTAGCGATTTAACCATTAATGAAACAATAAAAGCGTTCACAGGCGGTT
TAGGCGGGGGGGCTGAAGTTGCAATGAACTATGCAATTTTAGGTGCTTTTGCTATTGCCATCTCTAAATCAGGTATTACC
GATCTACTTGCTTTTAAAGTAATTAAACGCTTAGGTAAGTCGCCAACAGGTAATTCAATGGCTGGATTTAAGTACTTTAT
TCTTGCCATACTAGCGTTATTCTCAATTTCTTCGCAAAACTTATTACCAGTACACATCGCATTCATTCCAATTGTTATTC
CCCCACTCCTTTCAATTTTTAATAAACTAAAAGTTGACCGTCGTGCGGTTGCTTGCGTATTGACATTTGGATTGACTGCA
ACCTACATGCTTCTCCCTGTCGGTTTCGGTAAAATTTTTATTGATAGTGTTTTAGTAAAAAATATTAATCAAGTAGGTGC
TTCACTCGGCTTAAAAACCAGTGTAGCAGAAGTCTCTTTGGCAATGGCAATTCCGGTTATCGGTATGGTTATCGGTTTAT
TAACCGCAGTTTTCGTCACTTATCGTAAACCTCGAGAGTATGTTTCAGCCGGTTTAAATGCTACAACTGAAGAAATCGAA
AAGCACATTGCAAATATTAAGCCCTTCCATGTGATTGTAAGTGCGGTCGCAATTGTACTCACTTTCGCTTTACAACTGAT
AACCAGTTCAACAATTATCGCTGGTCTTGTCGGTCTCATTATTTTCGCAGTATTTGGTATTTTTAAACTAAAAGAAAGCA
ATGATATTTTCCAACAAGGCTTAAAATTAATGGCAATGATCGGTTTCGTAATGATTGCCGCTTCGGGCTTTGCTGCGGTA
ATTAATGCAACTGGCGGTGTAACAATTTTGGTGGATAATTTCAGCCAAGGCTTGGGTGCAGAAAATAAAGGTTTAGCTGC
ATTTCTTATGTTGCTTGTAGGTCTATTTATTACCATGGGAATCGGTTCATCCTTTTCAACTGTACCAATTATTACATCTA
TTTATGTGCCGCTTTGTCTTTCCTTTGGATTCTCACCGTTGGCAACTGTTGCAATTATCGGTGTTTCTGCCGCACTGGGC
GATGCTGGCTCACCTGCCTCAGACTCAACTTTAGGTCCGACATCCGGCTTAAATATGGACGGTAAACATGATCATATTTG
GGATTCTGTTGTACCAACATTCATCCACTACAATATTCCGCTCATTCTTTTTGGTTGGATTGCGGCAATGTTCCTTTAA

Protein sequence :
MILTNPVVISIIVLLALSLMRINVVMGLVISALVAGLCSDLTINETIKAFTGGLGGGAEVAMNYAILGAFAIAISKSGIT
DLLAFKVIKRLGKSPTGNSMAGFKYFILAILALFSISSQNLLPVHIAFIPIVIPPLLSIFNKLKVDRRAVACVLTFGLTA
TYMLLPVGFGKIFIDSVLVKNINQVGASLGLKTSVAEVSLAMAIPVIGMVIGLLTAVFVTYRKPREYVSAGLNATTEEIE
KHIANIKPFHVIVSAVAIVLTFALQLITSSTIIAGLVGLIIFAVFGIFKLKESNDIFQQGLKLMAMIGFVMIAASGFAAV
INATGGVTILVDNFSQGLGAENKGLAAFLMLLVGLFITMGIGSSFSTVPIITSIYVPLCLSFGFSPLATVAIIGVSAALG
DAGSPASDSTLGPTSGLNMDGKHDHIWDSVVPTFIHYNIPLILFGWIAAMFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 3e-108 54
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 3e-108 54
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-94 53
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-94 53
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-94 53
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-94 53