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Name : cadA (HS_1007) Accession : YP_719218.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Virulence Product : L-lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 1108445 - 1110571 bp Length : 2127 bp Strand : + Note : - DNA sequence : ATGAAACAAATACTCATTGGATACTCAATGTATAATGATCATTTGCAGAATTTAATTTCAGCATTGGAAGAAAAGGGGTA TAAAACTACCGCAGTAGATGGTCATCAAGAAATTTTGCATGCAGTGAAAAATAATGCAAGTATCATTTCTGTGATATTAA GCAATGATATTATAGATAAAGATCTGACTGACAAGATACTTTTACTAAATGAGGACCTGCCAATCTTTTCGTTAAAAGAC ACAGATGATTTAAACGAGAATTTAGATTTTGCAACAATTGGGCACCATGTTCAGTTTGTTGACTGCAATTTATATACTCT CGATGAGATTATTCATAAGATAGAAAGAGCGGTAGAAAAATATTTTGATTCAATTACACCACCACTTACTAAAGCATTAT TTAAATATGTTAATGAGGATAAATATACATTTTGTACCCCAGGACATATGGGAGGAACAGCATTTTTACGTTCTCCGATA GGTAGTGTTTTCTATGATTTTTTTGGTAAAAATACCTTTAAATCTGATATTTCGGTCTCTGTTGGTGAGTTGGGTTCTTT ATTGGATCATAGTGGACCACATAAGGAAGCTGAAAAGTACATTGCAAATGTATTTAATGCAGATAGAAGTTATATTGTGA CTAACGGAACCTCAACCGCAAATAAAATTGTTGGTATGTATTCTGCTCCCTCAGGTAGCACTGTTTTAATTGATCGTAAT TGTCATAAATCCTTGACTCATTTACTTATGATGAGCGATGTTACACCGATTTACTTAAAACCGACAAGAAATGCTTATGG TTTACTTGGTGGCATTCCTGAGCAAGAGTTCTCAAAATCTGCAATAGAGAAAAAATTAGCAGACATTGATAATCCGAATT GGCCTGTCCATGCTGTTATTACTAATTCAACTTATGACGGTCTATTTTATAACACAGACAAAATTAAGGAAACTCTTGAT GTAAAATCTATTCATTTCGATTCAGCATGGGTTCCATATACTAATTTCAATCCGATTTATGAAGGTAAAACAGGTATGGG CGGTAAGCGAGTTGAAGATAAAATTATCTATGAAACACAATCCACTCACAAATTACTTGCTGCATTTTCTCAAGCTTCAA TGATCCATATTAAAGGTCAAATAAATGAGGAAACTTTCAATGAAGCCTATATGATGCATACTTCAACCTCTCCACACTAT GGTATTGTATCGTCTACGGAAGTGGCTGCAGCCATGATGAAAAACAATACAGGAAAACAATTACTGCAAGATGCTATAAC AAGAGCGGTCAGATTTCGTAAAGAAATTAAGCAACGCATGCGAGAATCTCAATCTTGGTATTTTGATGTATGGCAACCTG AAAATATTTCTTCGACAGAGTGTTGGGAATTAAAACCGGGTGAGTCATGGCATGGATTTACTAATATTGACAAGCATCAT ATGTATTTAGATCCAATCAAGGTAACTTTATTAATGCCTGGCTTGAATAAAGACAACACCTTGGACCCCAACGGTATTCC AGCAACACTGGTATCCAACTACCTGGATTCTAAAGGAATTATTGTTGAAAAAACAGGTCCTTATAATATTCTTGTGTTAT TTAGTATCGGTATTGACGATACAAAAGCGATGAGCCTAATTCAAGCATTAGATGACTTTAAATCATTGTATGATGCCAAT GTGCTTGTGAAAGATATTTTACCAAATATCTATGCCCATGCTCCTAAGTTCTATGAAACAATGCGTATTCAAGAATTGGC AGGAGGAATCCATCGTTTGATATGTAAGCATAATTTACCAGATTTAATGTTCAAAGCATTTGATATATTGCCAAAAATGA TTATGACGCCTAACAAAGCTTTTAATTTAGAATTGAAAGGAAATATTGATGAATGCTATGTAGAAGATATGGTTGGCAAA ATCAATGCAAACATGATATTACCTTATCCTCCTGGTGTTCCTTTAATTATGCCTGGTGAGATGATCACTGAAGAAAGTCG TGCTATTTTAGAGTTTCTGGTCATGCTATGTGAAATAGGAACCCATTATCCTGGTTTTGAAACGGATATTCATGGTGCAT ATCGTCAAGACGATGGTCGCTACAAAGTAAAAATTATTAATATTTAA Protein sequence : MKQILIGYSMYNDHLQNLISALEEKGYKTTAVDGHQEILHAVKNNASIISVILSNDIIDKDLTDKILLLNEDLPIFSLKD TDDLNENLDFATIGHHVQFVDCNLYTLDEIIHKIERAVEKYFDSITPPLTKALFKYVNEDKYTFCTPGHMGGTAFLRSPI GSVFYDFFGKNTFKSDISVSVGELGSLLDHSGPHKEAEKYIANVFNADRSYIVTNGTSTANKIVGMYSAPSGSTVLIDRN CHKSLTHLLMMSDVTPIYLKPTRNAYGLLGGIPEQEFSKSAIEKKLADIDNPNWPVHAVITNSTYDGLFYNTDKIKETLD VKSIHFDSAWVPYTNFNPIYEGKTGMGGKRVEDKIIYETQSTHKLLAAFSQASMIHIKGQINEETFNEAYMMHTSTSPHY GIVSSTEVAAAMMKNNTGKQLLQDAITRAVRFRKEIKQRMRESQSWYFDVWQPENISSTECWELKPGESWHGFTNIDKHH MYLDPIKVTLLMPGLNKDNTLDPNGIPATLVSNYLDSKGIIVEKTGPYNILVLFSIGIDDTKAMSLIQALDDFKSLYDAN VLVKDILPNIYAHAPKFYETMRIQELAGGIHRLICKHNLPDLMFKAFDILPKMIMTPNKAFNLELKGNIDECYVEDMVGK INANMILPYPPGVPLIMPGEMITEESRAILEFLVMLCEIGTHYPGFETDIHGAYRQDDGRYKVKIINI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 67 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA | YP_719218.1 | L-lysine decarboxylase | VFG1670 | Protein | 0.0 | 67 |
