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Name : cadB (HS_1006) Accession : YP_719217.1 Strain : Haemophilus somnus 129PT Genome accession: NC_008309 Putative virulence/resistance : Virulence Product : lysine/cadaverine antiporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0531 EC number : - Position : 1107112 - 1108428 bp Length : 1317 bp Strand : + Note : antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein DNA sequence : ATGAATACAAAAAAAATTGGTTTAGTCGCCTGTATTGCGGTGGTTGCAGGTAATATGATGGGAAGCGGTATAGCACTTCT TCCTTCAAGTTTAGCTAAGATTGGATCTATTGCTATTTTTGGATGGATAATAGCAATAATAGGAGCTTTAGCACTTGCAT ATGTTTTTGCTAGACTCAGTACAAAAAATCCTCAAGCTGGAGGACCTGTAGCTTATGCAGGTGAAGTTTCACCTATATTT GGCTACCAAACATCAATTTTATACTACCACGCAAATTGGATTGGTAATTTAGCTATCGCTATTACTGCCATTGCTTATCT ATCAACATTTTTTCCTATTTTAAATGAACCTATTCCGGCAGCAATTGCAGCCATATGTGCAGTTTGGTTTTTTACTTTTA TCAATTTGTTAGGTGGCACATGGGTTAGTCGCTTTACCTCTATAGGATTAATTTTGGTATTAATTCCAGTTGTTGGTACT GCTTTACTAGGTTGGACACATTTTAACGTGGAAATTTATAAAGCAAACTGGTTGGCTAATCCAGATGTGCATTCCATGAA AGCAGTGATTAATTCAGTATTGTTATGTTTATGGGCTTTTGTTGGGGTTGAATCTGCTGCAGTGAGTAGCGATTTAGTTG AGAATCCTAATAAGACAGTTCCTCTAGCCACATTATTAGGTACAGGATTAGCGGGAATTATTTATGTTATGGCATCTCAA GTAATTTCAGGCATGTTCCCTAATGAAATTACTGCTACATCAGGGGCTCCTTTTGCCTTAAGTGTCTCCGCTATTGTAGG TGATTGGGCAAGTCCTATTGTATCAGCGTTTACTGCAATAGCTTGTCTTACGTCTTTAGGCTCATGGATGATGTTAGTTG GACAAGCTGGTAGAAGGGCTGCTGATGATGGTAATTTCCCTAAAATGTTCGGTGAAGTAGATAAGAATGGAACACCAAAA AAAGGACTATTTGCCGCCTCAATAATGATGACGATTTTGATGATCCTACTTACCATAGTGACAACTAGCGGATCTAGTGC ATCAGATTTATTCACTCAATTAACCAGCGTAGCTGTTCTCTTAACCATGTTCCCATATTTTTATTCCATTATAGATTTAA TTCGCTTAGAAGGATTAACTTCTAAAAGCACATTTAGTTTAATTGCCTCAAGTTTAGCAATCCTATTTTGTTTTGCCGCA CTTGCTGGAGCTGAACATTATCAAATCACAGCAACAATTCTAATCGCTTTATGTATCTTCGCTTTTTATGCAAAGAAATT AGGTACAAAACAATTACATCAAATAAACAATCATTAA Protein sequence : MNTKKIGLVACIAVVAGNMMGSGIALLPSSLAKIGSIAIFGWIIAIIGALALAYVFARLSTKNPQAGGPVAYAGEVSPIF GYQTSILYYHANWIGNLAIAITAIAYLSTFFPILNEPIPAAIAAICAVWFFTFINLLGGTWVSRFTSIGLILVLIPVVGT ALLGWTHFNVEIYKANWLANPDVHSMKAVINSVLLCLWAFVGVESAAVSSDLVENPNKTVPLATLLGTGLAGIIYVMASQ VISGMFPNEITATSGAPFALSVSAIVGDWASPIVSAFTAIACLTSLGSWMMLVGQAGRRAADDGNFPKMFGEVDKNGTPK KGLFAASIMMTILMILLTIVTTSGSSASDLFTQLTSVAVLLTMFPYFYSIIDLIRLEGLTSKSTFSLIASSLAILFCFAA LAGAEHYQITATILIALCIFAFYAKKLGTKQLHQINNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66196.1 | putative lysin/cadaverin transporter | Virulence | PAI III 536 | Protein | 8e-137 | 78 |
| cadB | NP_756989.1 | lysine/cadaverine antiporter | Not tested | PAI II CFT073 | Protein | 4e-119 | 66 |
| cadB | AAL67382.1 | cadaverine/lysine antiporter | Not tested | PAI II CFT073 | Protein | 3e-119 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadB | YP_719217.1 | lysine/cadaverine antiporter | VFG1671 | Protein | 5e-137 | 78 |
