Gene Information

Name : FRAAL0081 (FRAAL0081)
Accession : YP_710380.1
Strain : Frankia alni ACN14a
Genome accession: NC_008278
Putative virulence/resistance : Virulence
Product : manganese transport system ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : 3.6.3.25
Position : 84810 - 85568 bp
Length : 759 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence : 
ATGTCCCGACCCGCCGCGATCGTCTTCGACCAGGCGAGCATCGCCTATGGGCGGGTGCCTGCGTTGGAGCAGGTCCACGG
CACGGTGCGCCAAGGGGAGATCGTCGCGCTCGTCGGGCCGAACGGTGCCGGCAAGTCGACCCTGATCAAGGCGCTGCTCG
GCCTGGTGCCGGTCGCGTCGGGTTCGATCACCGTCCTCGGCCTGCCACCCGCGCAGGCGCGCCGGCTGGTCGCCTACGTG
CCGCAGGCGGACACGCTCGACCCGGACTTCCCGGTCTCGGTGGCGCAGGTCGTCCTGATGGGCCGCTACCGGCGGATCGG
CTGGCTGCGGCCGCCCGGGCGGGCTGATCGGGACGCGGCCGCCGAGGCGCTGGCGGCGGTGGGCCTCGCGCACCGGGCGG
CGGACCGGTTCGGCACGCTGTCCGGGGGGCAGCGCCAGCGGGTGCTGCTCGCGCGGGCGATCGCGGCACAACCACAGGCG
CTGCTGCTCGACGAGCCCTTCAACGGGGTCGACGCGGTCTCCCAGGAGGCTCTGCTGGCCACGATCAAGACTCTCGCCGC
CGGCGGCGCCGCGGTCGTCGTGTCCACCCACGACCTGGGCCTTGCACAGTTGACCTGCGACGGCATTTGCCTGCTCAACC
GGCATCAGTTCGGCTTCGGGCCGCCGGGGGACGTGCTCACCCCCGATCTGCTGCGCGCCGCCTATGGCGGGGCGGCACTG
GAGCTGGGCGATCGCGGGCTGATCGTCGCCCGCTCATGA

Protein sequence : 
MSRPAAIVFDQASIAYGRVPALEQVHGTVRQGEIVALVGPNGAGKSTLIKALLGLVPVASGSITVLGLPPAQARRLVAYV
PQADTLDPDFPVSVAQVVLMGRYRRIGWLRPPGRADRDAAAEALAAVGLAHRAADRFGTLSGGQRQRVLLARAIAAQPQA
LLLDEPFNGVDAVSQEALLATIKTLAAGGAAVVVSTHDLGLAQLTCDGICLLNRHQFGFGPPGDVLTPDLLRAAYGGAAL
ELGDRGLIVARS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-31 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-31 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-32 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-32 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FRAAL0081 YP_710380.1 manganese transport system ATP-binding protein BAC0400 Protein 2e-31 43
FRAAL0081 YP_710380.1 manganese transport system ATP-binding protein BAC0350 Protein 5e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FRAAL0081 YP_710380.1 manganese transport system ATP-binding protein VFG0526 Protein 5e-32 42