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Name : thiC (FRAAL0800) Accession : YP_711068.1 Strain : Frankia alni ACN14a Genome accession: NC_008278 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 874015 - 875985 bp Length : 1971 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCGCCATTCAACCGTGATGTGTCGTCCCCTTCTTCCGGGAAGGGCCCCGATCTCGACGGGGAAGATTCCCGGCCGGA ATCCGAGCCCGTCTCGGTGGAAATCCCGAGTGTTTTTCCGGCGGCCTCGCCAGGCGGGACACCGGGCCAGCCCGCGTCCC AGGCGGCGCCCGGCGCGCCCCAGGGGTCGCCTGCCGCGCCCCGGGCGACGGCCGTCTCGACCGGGCCGCTGGCGGGCAGT CGCAAGACCTGGCTCGTCGGCGCGGATCCCGACCTGCGGGTGCCGATGCGGGAGGTCGTCCTCACCACCGGCGACAGCGT CGTGCTCTACGACACCTCCGGCCCGTACACGGATCCGGCGGCGGACGTCGACGTGCGCCGGGGCCTGCCGCCGCTGCGGG CACGGTGGATCGCCGAGCGGGGGAACACCGCCCCGGCCGGCGGGCGGGGCGCGCTGCGGGCCCGGCCCGGCGGGGGAGCG GTCACCCAGCTCTCCCACGCGCGCCGGGGCGAGATCACCCGGGAGATGGAGTTCGCCGCCCTGCGTGAGGGGCTGCCCGT CGAGACCGTGCGGGCCGAGATCGCCGCCGGGCGTGCCGTCCTGCCGGCGAACGTGAACCATCCCGAGTCCGAGCCGATGG TGATCGGCCGGTCCTTCCTGGTGAAGATCAACGCGAACCTCGGCAACTCGGCCGTGACCTCCTCCATCGAGGAGGAGGTC GAGAAGATGGTCTGGGCCACCCGGTGGGGTGCCGACACCGTCATGGACCTGTCCACCGGCGCCGACATCCACCGGACCCG CGAGTGGATCCTGCGCAACGCCCCGGTCCCGGTCGGCACGGTGCCCATCTACGAGGCGTTGGAGCAGGTCGGCGGCCGGC CCGAGGCGCTGACCTGGGAGGCCTACCGGGACACCGTCATCCGCCAGTGCGAGCAGGGGGTGGACTACATGACGGTCCAC GCCGGGGTGCTGCTGCGTTACGTGCCGCTGACCGCGCGGCGGCGGACCGGGATCGTCTCGCGCGGCGGTTCGATCCTGGC GTCCTGGTGCCTCGCCCACCACGAGGAGAACTTCCTCTACACCCACTTCGCCGAGCTGTGCGAGATCCTCGCCGCCTACG ACGTGACGTTCTCGCTCGGCGACGGCCTGCGGCCCGGCTCGATCTCGGACGCCAACGACGACGCCCAGCTCGCCGAGCTC GCCACCCTGGGGGAGCTGACCCGCGTCGCGTGGGAGCACGACGTGCAGGTGATGGTGGAGGGGCCCGGCCACGTCCCGCT GCACCGCGTCGAGGAGAACGTCCGCCTGCAGCGGGAGATCTGCCACGACGCGCCGTTCTACACGCTCGGGCCGCTCACCA CCGACGTCGCGCCCGGCTACGACCACATCACCTCGGCGATCGGCGCCGCGGTGATCGGCTGGCACGGCACGGCGATGCTC TGCTACGTCACCCCGAAGGAGCATCTCGGTCTGCCCGACCGCGACGACGTCAAGGCCGGCGTCATCGCCTACAAGATCGC GGCCCATGCGGCGGACCTCGCCAAGGGGCATCCCGGCGCGCGGGCCTGGGACGACGCGCTGTCGGACGCCAGGTTCGAGT TCCGCTGGGCCGACCAGTTCCACCTGGCGATGGACCCGGACACCGCCCGGTCCTACCACGACGAAACCCTGCCCGCCCCC GCCGCGAAGACGGCCCACTTCTGCTCGATGTGCGGACCGCACTTCTGCTCGATGAAGATCTCCCACCAGGTGCGGGCCGC CGGGGACGGCGCCGCCCCGGCCGTCCGGACCGGTCCAGCCGCCGTAACCGGTCCGGCCGCTCTGACCGACCCGGCCGCTC TGACCGACCCGGCCGCCCTGGCCCCGCACCCGGCCACGGCGGACGAGGAGGTCGCCGCGGGACTTCGGGCCAAGGCCGCG GAGTTCGCCGCGGCCGGCAACCGGATCCACCTCCCGATCGCCGGCCCCTGA Protein sequence : MSPFNRDVSSPSSGKGPDLDGEDSRPESEPVSVEIPSVFPAASPGGTPGQPASQAAPGAPQGSPAAPRATAVSTGPLAGS RKTWLVGADPDLRVPMREVVLTTGDSVVLYDTSGPYTDPAADVDVRRGLPPLRARWIAERGNTAPAGGRGALRARPGGGA VTQLSHARRGEITREMEFAALREGLPVETVRAEIAAGRAVLPANVNHPESEPMVIGRSFLVKINANLGNSAVTSSIEEEV EKMVWATRWGADTVMDLSTGADIHRTREWILRNAPVPVGTVPIYEALEQVGGRPEALTWEAYRDTVIRQCEQGVDYMTVH AGVLLRYVPLTARRRTGIVSRGGSILASWCLAHHEENFLYTHFAELCEILAAYDVTFSLGDGLRPGSISDANDDAQLAEL ATLGELTRVAWEHDVQVMVEGPGHVPLHRVEENVRLQREICHDAPFYTLGPLTTDVAPGYDHITSAIGAAVIGWHGTAML CYVTPKEHLGLPDRDDVKAGVIAYKIAAHAADLAKGHPGARAWDDALSDARFEFRWADQFHLAMDPDTARSYHDETLPAP AAKTAHFCSMCGPHFCSMKISHQVRAAGDGAAPAVRTGPAAVTGPAALTDPAALTDPAALAPHPATADEEVAAGLRAKAA EFAAAGNRIHLPIAGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-174 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-174 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-163 | 61 |
