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Name : clpB (FRAAL6680) Accession : YP_716806.1 Strain : Frankia alni ACN14a Genome accession: NC_008278 Putative virulence/resistance : Virulence Product : ATP-dependent protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 7276713 - 7279217 bp Length : 2505 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 8016066; Product type mc : molecular chaperone DNA sequence : ATGTTCGAGAGATTCACCGACCGGGCACGTCGGGTCGTCGTCCTGGCCCAAGAAGAGGCCAGGATGCTCAACCACAACTA CATCGGGACCGAGCACATCCTGCTTGGCCTGATCCACGAGGGCGAGGGCGTCGCCGCCAAGGCCCTCGAGTCCCTCGGCA TCTCCCTTGAGGGTGTGCGGTCGCAGGTCGAGGAGATCATCGGCCAGGGCCAGCAGGCACCGAGCGGGCACATCCCGTTC ACCCCGCGTGCGAAGAAGGTCCTGGAGCTGTCGCTTCGGGAGGCCCTCCAGCTCGGCCACAACTACATCGGGACCGAACA CATCCTGCTTGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTGCTCGTCAAGCTGGGCGCGGACCTCAACCGCG TGCGTCAGCAGGTCATCCAGCTCCTGTCCGGGTACCAGGGCAAGGGCGAGACGGCCACCTCCGGCGCTCCGGCCGAGGGC ACCCCGTCCACCTCGCTGGTGCTCGACCAGTTCGGCCGCAACCTCACCGCGGCGGCGCGCGAGTCCAAGCTCGACCCGGT CATCGGGCGCGAGAAGGAGATCGAGCGCGTCATGCAGGTGCTGTCGCGCCGGACCAAGAACAACCCGGTCCTGATCGGCG AGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTGGCGCAGGCGATCGTCAAGGGCGAGGTGCCCGAGACCCTGAAG GACAAGCAGCTCTACACCCTCGACCTCGGCGCTCTGGTCGCCGGTTCCCGCTACCGCGGTGACTTCGAGGAGCGGCTGAA GAAGGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGCGCGGGCG CCGCCGAGGGCGCGATCGACGCCGCGTCGATCCTCAAGCCGATGCTCGCCCGCGGCGAGCTGCAGACGATCGGTGCCACC ACCCTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAGCCGATCCAGGTCGCGGAGCC GTCGGTGGCGCACACCATCGAGATCCTCAAGGGCCTGCGCGACCGTTACGAGGCGCACCACCGCGTGTCGATCACCGACG CCGCCCTGGTCGCCGCCGCCTCCCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATC GACGAGGCCGGCTCGCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGCGCATCGCGGG TGTCCGCCGCGACAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGAAGGCCGCCTCGCTGCGGGACAAGGAGAAGACCC TCCTGTCCGAGAAGGCGAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTGGGCGACGAGGAG ATCGCCGAGGTGCTCGCCATCTGGACGGGCATCCCGGTCTTCAAGCTCACCGAGGAGGAGACGGCCCGTCTGCTGCGCAT GGAGGACGAGCTGCACAAGCGGGTCATCGGCCAGCAGCAGGCCATCAAGGCCGTCTCGCAGGCGATCCGGCGCACCCGCG CCGGGCTGAAGGACCCCAAGCGTCCCGGCGGGTCGTTCATCTTCGCCGGCCCGTCCGGAGTCGGTAAGACCGAGCTGTCC AAGACGCTCGCCGAGTTCCTCTTCGGCGACGAGGACGCGCTCATCCAGCTCGACATGTCCGAGTACATGGAGAAGCACAC CGTCTCGCGGCTGGTGGGCTCCCCGCCCGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGCGGGTGCGGCGCA AGCCGTTCTCGGTCGTCCTGTTCGACGAGGTCGAGAAGGCCCACCCCGACGTCTTCAACACGCTCCTGCAGATCCTGGAG GACGGTCGCCTGACCGACTCCCAGGGCCGGCTGGTCGACTTCAAGAACACCGTCCTGATCATGACGTCGAACCTGGGCAC CCGAGACATCTCCAAGGGCCCCGGCATCGGCTTCGCCACCGGTCAGGGCGCCGTCGACTACGAGCGGATGAAGGCGAAGG TCCAGGACGAGCTCAAGCAGCACTTCCGGCCGGAGTTCCTCAACCGGATCGACGACATCATCGTCTTCCACCAGCTCTCC GAGAACGAGATCATCCAGATCGTCGATCTCATGCTGGCCCGGGTGGACATCCAGCTCAAGAACAAGGACATGGCCCTCGA GCTGACGTCGGCCGCCAAGGCGCTGCTGGCGAAGAAGGGCTACGACCCCGTGCTCGGCGCCCGGCCGCTGCGCCGGACGA TCCAGCGGGAGATCGAGGACGTCCTGTCCGAGAAGATCCTGTACGGCACGCTCAAGCCGGGCGAGATCGTCGTCGGCGAC GTCGAGGGCGAGGGGGACGACGCCAAGTTCGTCTTCCGCGGCGAGACCAAGCCGAACCAGGTGCCCGACGCCCCGCCGGT CGACCTCGCCAAGTCCAGCGAGTAG Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKGETATSGAPAEG TPSTSLVLDQFGRNLTAAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLK DKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT TLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILKGLRDRYEAHHRVSITDAALVAAASLADRYISDRFLPDKAIDLI DEAGSRMRIRRMTAPPDLREFDERIAGVRRDKESAIDAQDFEKAASLRDKEKTLLSEKAKREKEWKAGDMDVVAEVGDEE IAEVLAIWTGIPVFKLTEEETARLLRMEDELHKRVIGQQQAIKAVSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELS KTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPGYVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQILE DGRLTDSQGRLVDFKNTVLIMTSNLGTRDISKGPGIGFATGQGAVDYERMKAKVQDELKQHFRPEFLNRIDDIIVFHQLS ENEIIQIVDLMLARVDIQLKNKDMALELTSAAKALLAKKGYDPVLGARPLRRTIQREIEDVLSEKILYGTLKPGEIVVGD VEGEGDDAKFVFRGETKPNQVPDAPPVDLAKSSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 76 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-96 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_716806.1 | ATP-dependent protease | VFG0079 | Protein | 0.0 | 63 |
| clpB | YP_716806.1 | ATP-dependent protease | VFG0080 | Protein | 3e-147 | 52 |
