|
Name : kdpB (FRAAL5301) Accession : YP_715466.1 Strain : Frankia alni ACN14a Genome accession: NC_008278 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 5751402 - 5753675 bp Length : 2274 bp Strand : - Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGACCACCACCGTCATCGCCCCGCCCGGCGCCGCGCCGCGGCCGGGCCGGGGCCGGGGCGGGCCGCGCCGGGTCGGCGG CGGCCTGCTCGACCCGCGCCAGCTCGGCCGCTCGCTGCCCGCGGCCCTGCGCAAGCTCGACCCCCGCACGCTGTGGCACA ACCCGGTCATGCTGATCGTCGAGGTCGGTGCGGCGTTCACGACCGTGCTGGCGATCGCCGACCCGTCCGTGTTCGGCTGG CTGATCACCGTCTGGCTGTGGCTCACCGTCGTCTTCGCGAACCTCGCCGAGGCCGTCGCCGAGGGCCGCGGCAAGGCCCA GGCCGCGGCGCTGCGGCGCACCCGCACCGACACGATCGCCCGCCGTCTGACCGGCTGGTCGCCCGGCCAGGCCGCCCCCT CCGACGCCGAGATCGCCGCCGGGGCTCTCGCCGCGGGGGAGCGGATCTCGGTGCAGGAGGTGCCCGCGCCCGGGCTCGTA CGCGGGGACATCGTCGTCGTGGCCGCCGGGGAGCTCATCCCCGGGGACGGGGACGTGGTCGAGGGCATCGCCAGCGTCGA CGAGTCGGCGATCACGGGGGAGTCCGCGCCGGTGATCCGCGAGTCCGGCGGCGACCGGTCGTCGGTCACCGGCGGGACGA GGGTGCTCTCCGACCGGATCGTCGTGCGGATCACCCAGCAGCCCGGGGAGAGCTTCATCGACCGGATGATCGGCCTCGTC GAGGGCGCCGACCGGCGCCGCACCCCGAACGAGATCGCGCTGAACATCCTGCTCGCCGCGCTCACCGTCATCTTCCTGCT CGCCGTCGCCACCCTGCAGCCGCTGGCGATCTTCACCAAGGCGCAGCAGCCCGCCATCCCGGACTCGGCGGCGCTGACCG GTCACGGGATCACCGGCATCGTGCTGGCGTCCCTGCTGGTCTGCCTCATCCCGACCACGATCGGGGCGCTGCTGTCCGCG ATCGGCATCGCCGGGATGGACCGGCTCGTCCAGCGCAACGTGCTCGCGATGAGCGGCCGGGCGGTCGAGGCCGCCGGCGA CGTCAACACGCTGCTGCTCGACAAGACCGGCACGATCACCTTCGGCAACCGTCAGGCCCGGGAGTTCCTCCCGGTCGGCG GGATCGATGCGGCCGCCCTCGCCGACGCCGCGCAGCTGTCCTCGCTCGCCGACGAGACGCCGGAGGGCCGTTCGGTCGTC GTGTTCGCCAAGGAGCACCACGGCCTGCGCGAACGCTCACCCGGCGAGCTACGCACGGCGACGTTCGTCCCCTTCACCGC CCAGACCCGGATGTCCGGCGTCGACCTCGCCGACCCGGCCGACGGCGTCGAGAGCGCGGGCGTGGGCGGGGCCGGCGGGC AGAGGCGTCGGCGGATCCGCAAGGGCGCGGCCAGCGCGGTGATCCTCTGGGTGCGCCAGGCCGGCGGGACGATCCCCGCC GAGCTGGGCGAGATCGTCGACGGGGTCTCCGCCGCCGGCGGGACGCCGCTGGTCGTAGGGGAGATCACCGGCGCCGGCCC GGCGGCGCACGCCCGGGTCCTCGGCGTCATCCAGCTCGCCGACGTCGTCAAGAGTGGCATGCGGGAACGGTTCGACGAGA TGCGCCGGATGGGCATCCGCACCGTAATGATCACCGGCGACAACCCGCTGACGGCGAAGGCGATCGCCGAGGAGGCCGGG GTCGACGACTTCCTCGCCGAGGCCACCCCGGAGGACAAGCTCGCCCTCATCCGCGCCGAGCAGGCCGGCGGCAAGCTCGT CGCGATGACCGGCGACGGCACGAACGACGCCCCGGCGCTCGCCCAGGCCGACGTCGGCGTCGCCATGAACACCGGCACCT CCGCCGCGAAGGAGGCCGGCAACATGGTCGACCTCGACAGCGACCCGACTAAGCTGATCGAGATCGTCGAGATCGGCAAG CAGTTGCTGATCACCCGCGGGGCGCTGACCACGTTCTCCATCGCCAACGACGTCGCCAAGTACTTCGCGATCATCCCGGC GATGTTCGCCGGCGTCTACGGCGGGCTGGACCGGCTCAACATCATGCGGCTGGCCACCCCCGAGTCGGCGATCCTGTCCG CCGTCATCTTCAACGCGCTCGTCATCGTCGCCCTGATCCCGCTGGCGCTGCGCGGAGTGCGCTACACGCCGAGCAGCGCC TCCGCCCTGCTGTCGCGCAACCTGTCCCGTTACGGCCTCGGCGGGATCATCGCGCCGTTCGTCGGCATCAAGATCATCGA TCTGCTCGTCCAGTTCATCCCGGGGGTGGGTTGA Protein sequence : MTTTVIAPPGAAPRPGRGRGGPRRVGGGLLDPRQLGRSLPAALRKLDPRTLWHNPVMLIVEVGAAFTTVLAIADPSVFGW LITVWLWLTVVFANLAEAVAEGRGKAQAAALRRTRTDTIARRLTGWSPGQAAPSDAEIAAGALAAGERISVQEVPAPGLV RGDIVVVAAGELIPGDGDVVEGIASVDESAITGESAPVIRESGGDRSSVTGGTRVLSDRIVVRITQQPGESFIDRMIGLV EGADRRRTPNEIALNILLAALTVIFLLAVATLQPLAIFTKAQQPAIPDSAALTGHGITGIVLASLLVCLIPTTIGALLSA IGIAGMDRLVQRNVLAMSGRAVEAAGDVNTLLLDKTGTITFGNRQAREFLPVGGIDAAALADAAQLSSLADETPEGRSVV VFAKEHHGLRERSPGELRTATFVPFTAQTRMSGVDLADPADGVESAGVGGAGGQRRRRIRKGAASAVILWVRQAGGTIPA ELGEIVDGVSAAGGTPLVVGEITGAGPAAHARVLGVIQLADVVKSGMRERFDEMRRMGIRTVMITGDNPLTAKAIAEEAG VDDFLAEATPEDKLALIRAEQAGGKLVAMTGDGTNDAPALAQADVGVAMNTGTSAAKEAGNMVDLDSDPTKLIEIVEIGK QLLITRGALTTFSIANDVAKYFAIIPAMFAGVYGGLDRLNIMRLATPESAILSAVIFNALVIVALIPLALRGVRYTPSSA SALLSRNLSRYGLGGIIAPFVGIKIIDLLVQFIPGVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-151 | 56 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-151 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 3e-135 | 52 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-135 | 52 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-135 | 52 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-135 | 52 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-135 | 52 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-135 | 52 |
