Gene Information

Name : trpE (FRAAL4650)
Accession : YP_714835.1
Strain : Frankia alni ACN14a
Genome accession: NC_008278
Putative virulence/resistance : Virulence
Product : anthranilate synthase component I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0147
EC number : 4.1.3.27
Position : 5042634 - 5043971 bp
Length : 1338 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGGGCTCGCCGTGTTACGTCGAAGCCAGAGTCAAGACATCGGAAGATCCCCTGGCCGTCATGGCCCGACTGGCCGAGTC
CGGTCCCCACCACGAGTTCGTCGTCTATGAGAACGAGAGCATCTGGTGCTATGCGGGCGGCATTCTCGCCGATATTCGCC
TCGACCGCGACGGCGCGACGCTGCGAGGTGTGCGGGAGGCGGAGTTTGCCTGGGACGGCCGGCCGCTGCGGCGGGTCAGT
GAGCTGCTCGCCATGCTGCCGCTGCCGCAGTGGCGAGTGTATGGCTGGGCCGCGTTCGAACTTTCCTACGCGAGGGACGG
CAGCCGGGAGCGTCTAGACAACGAGCGGCTTCTACACCTCATCGTGCCGCGAAGCGAGGTGCGTCTGCACGCCGGCGTGG
CTCACGTGCGTTCCAGCGACCCCGGCACCCTTGCGACGCTCGTCGACCTGCTTTCCACGCGGGCGGACAGTGCCCACCGC
CGGGCGGCGCCGATCAACGTGCGGAACATCGGCCGAGACGAGTACTGCGCGTCAGTCGCGAGCGCCGTCCAGGAGATCAC
TGCAGATGTGTTGCAGAAGGTCATCCTGTCGCGGAAGATCGAGATTGACAGCGACATCGACCTGGCCGCCTCCTATGTTC
TTGGCAGGCGTAGGAACAATCCCGCCCGGTCCTTCCTGCTGCGGTTGGACGGGCTGGAAGCAGCCGGTTTCAGCCCGGAG
ATCGTGGTCAGCGTCGACGTGGACGGCACGGTCGTCAGCCACCCGCTTGCCGGCACGAGGGCATTCACGGAGAGCGCCGC
GGAGAACACCCGCCGGCGCCTGGAACTCCTGTCGTCCGCGAAGGAGATCTATGAGCACGCCATCTCCGTCAAGATCGGCC
ATGACGAATTGCTCACGGTCTGCGAACCGAACTCGGTGGGAGTTCGCGACCTCATGTCGGTCGAGGAAAGGGGTAGCGTC
CAGCATCTCGCCTCCCAGGTGACCGGAAAGCTGGCGGCCGGGGCGGACGCCTGGGACGCCTTCACGGCTGTCTTTCCCGC
GGTCACCGTGTCGGGAGTACCAAAGGAAGCGGCCTTCGCCGCGATTCGACGCCACGAGGGGGACCGTCGCGGCCTCTACG
GCGGCGCAGTCCTGACCGTCGACAGTTCCGGCGCGCTGGACGCCGCACTGGTCCTGCGCACGGTCTTCCGCGAGAACGGT
CGCACCTGGCTGCGTGCGGGTGCCGGGATAGTCGGTCAGTCACAGCCAGCCAGGGAATTCGAGGAGACCTGCGAGAAGCT
CGACAGCGTGGCGCGCTTCCTGGTTGCCAACGAGATCAGGGAAGAGGTCGATGCATGA

Protein sequence :
MGSPCYVEARVKTSEDPLAVMARLAESGPHHEFVVYENESIWCYAGGILADIRLDRDGATLRGVREAEFAWDGRPLRRVS
ELLAMLPLPQWRVYGWAAFELSYARDGSRERLDNERLLHLIVPRSEVRLHAGVAHVRSSDPGTLATLVDLLSTRADSAHR
RAAPINVRNIGRDEYCASVASAVQEITADVLQKVILSRKIEIDSDIDLAASYVLGRRRNNPARSFLLRLDGLEAAGFSPE
IVVSVDVDGTVVSHPLAGTRAFTESAAENTRRRLELLSSAKEIYEHAISVKIGHDELLTVCEPNSVGVRDLMSVEERGSV
QHLASQVTGKLAAGADAWDAFTAVFPAVTVSGVPKEAAFAAIRRHEGDRRGLYGGAVLTVDSSGALDAALVLRTVFRENG
RTWLRAGAGIVGQSQPAREFEETCEKLDSVARFLVANEIREEVDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAD17661.1 unknown Not tested HPI Protein 1e-47 46
APECO1_1052 YP_853070.1 salicylate synthase Irp9 Not tested PAI IV APEC-O1 Protein 4e-49 41
ybtS YP_002346907.1 salicylate synthase Irp9 Not tested HPI Protein 4e-49 41
ybtS NP_669701.1 salicylate synthase Irp9 Not tested HPI Protein 4e-49 41
ybtS YP_070129.1 salicylate synthase Irp9 Not tested HPI Protein 4e-49 41
ybtS CAA21385.1 - Virulence HPI Protein 4e-49 41
irp9 CAB46570.1 salicylate synthetase, Irp9 Virulence HPI Protein 4e-48 41
irp9 YP_001006810.1 salicylate synthase Irp9 Not tested HPI Protein 2e-48 41