|
Name : FRAAL4449 (FRAAL4449) Accession : YP_714638.1 Strain : Frankia alni ACN14a Genome accession: NC_008278 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 4835859 - 4837589 bp Length : 1731 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter DNA sequence : TTGGAGCCGGCGGTGCGGCCCGGCGAACCCCGAACCCTCGTCGACGTGGCGAACCTGCACGTGCGGTTTCGGCTGGGCCG GCGCGCGGTCGACGCCGTGCGCGGGGTGTCGTTCCGCATCGACGCCGGTCAGAGCATCGCCGTCGTCGGGGAGTCGGGCT CGGGCAAGAGCGTCACCGCCCGCAGCCTCGTCGGCCTGGCGGGACGCGGGGCCGAGGTGCGGGCCGACCGCCTGGTCATC GACGGCACGGACGCCCGGGCGCTGCCCGAACGCCGGTGGCGAACCCTGCGCGGCCGGCACATCGGCTTCGTCCTGCAGGA CGCGCTCGTCTCACTCGATCCGGCCCGCCGGGTCGGCGCCGAGATCGCCGAGACGCTGCGGGCCCATCGGGTGGTCCCGC GGGCGGAGGTCGACGCGCGGGTGGTCGAGCTGTTGCGGGAGGTCGGCGTGCCGGAGCCGGCGGCCCGCGCGGGCCAGTAC CCGCATCAGCTCTCCGGCGGGCTGCGGCAGCGGGCCCTGATCGCCTCGGCGATCGCGGCCGACCCGGCGCTGCTCATCGC CGACGAGCCGACCACCGCGCTGGACGTCACGGTGCAGGCCCAGATCCTCGAGATGCTCGCCGCGCGCCGGCGGGCCGGGA CGGCGCTGCTGCTCATCAGCCACGACCTGGCGGTCGTGTCCCAGGTCGCCGACCACGTCTTCGTCATGAAGGACGGAGTC TTCGTCGAGCACGGCCCGACCCGGCAGGTGCTCGACGACCCGCGGCACCCCTACACCCGCCAGCTCCTCGCCGCCGTGCC GGTCGCGCACGCCCGCGGCACCCGACTGTCACCGCAGCCCGGTGGCCCGGTGGCGCAGCCTCGGGCGGTCGTCGGCGACG GGGTCGTGCTGGCGGCCAGGAACCTGGTCAGGACGTTCGCCCTGGACGGGCGCCGCACCCTGACCGCCGTGGACGACGTG TCGTTGGAACTGCGGGCCGGGGAGACGCTCGGCATCGTCGGCGAGTCCGGATCCGGCAAGACCACGACCGCCCGGCTGCT GCTGGACCTGGAGCGGGCAAACTCCGGCACGGTCGAGGTCGACGGCACGGCCTGGGGCGAGATCGACGTCCGGACCAGTG CGCGGCTGCGCCAGCACATCCAGGTGATCTATCAGGACCCGCTCAGCTCGTTCGATCCGCGCTACCCGGTCCGGAAGATC GTCGCCGAGCCGCTGGCCGTGGCCCGGGTCCCTCGCGCCGAGCGCCGGAGCCGGGTGCTGGAGCTGCTCGACCAGGTCGG GCTGGGGCGCGACGTGCTGGACAGGCGACCGCGCCAGCTCTCCGGCGGGCAGCGCCAGCGGGTGGCGATCGCCCGGGCAC TGGCTCCCCGGCCGCGCGTCATCGTCTGCGACGAGCCGGTCTCGGCCCTCGACGTCTCCATCCAGGCCCAGATCCTCGAC CTGCTCGCCGATCTGCAGGCCCGGCTCGGCATCGCCTACGTGTTCATCTCCCACCACCTCGGCGTGATCTACCACGTCAG CGACCGTGTGCTGGTCATGAAGGACGGCCGGATCGTCGAGTCCGGCGATGTCGAGCGGGTCTTCCGGGAGCCGCGGCACG AGTACACCCGTGGCCTGCTCGCCGCGGTGCCGACGCTGGACGGCGCCGCGCTGCGCCCCCCCGTGGAACCACGGGCGACG GTGGAACCACGGGCGACGAGCGTGGTGGACAGTGAAGGAGCGGTGGCGTGA Protein sequence : MEPAVRPGEPRTLVDVANLHVRFRLGRRAVDAVRGVSFRIDAGQSIAVVGESGSGKSVTARSLVGLAGRGAEVRADRLVI DGTDARALPERRWRTLRGRHIGFVLQDALVSLDPARRVGAEIAETLRAHRVVPRAEVDARVVELLREVGVPEPAARAGQY PHQLSGGLRQRALIASAIAADPALLIADEPTTALDVTVQAQILEMLAARRRAGTALLLISHDLAVVSQVADHVFVMKDGV FVEHGPTRQVLDDPRHPYTRQLLAAVPVAHARGTRLSPQPGGPVAQPRAVVGDGVVLAARNLVRTFALDGRRTLTAVDDV SLELRAGETLGIVGESGSGKTTTARLLLDLERANSGTVEVDGTAWGEIDVRTSARLRQHIQVIYQDPLSSFDPRYPVRKI VAEPLAVARVPRAERRSRVLELLDQVGLGRDVLDRRPRQLSGGQRQRVAIARALAPRPRVIVCDEPVSALDVSIQAQILD LLADLQARLGIAYVFISHHLGVIYHVSDRVLVMKDGRIVESGDVERVFREPRHEYTRGLLAAVPTLDGAALRPPVEPRAT VEPRATSVVDSEGAVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-93 | 45 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-66 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-66 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-66 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-66 | 41 |
