Gene Information

Name : FRAAL4162 (FRAAL4162)
Accession : YP_714357.1
Strain : Frankia alni ACN14a
Genome accession: NC_008278
Putative virulence/resistance : Virulence
Product : iron-siderophore ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 4503128 - 4504123 bp
Length : 996 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type c : carrier

DNA sequence :
GTGTCGATCCGGGTCCGGCCGCGCGCCGTCGTGGTCGGCGTCGTGCTGGCGGCGCTGGTACTGATCTTCGGTGTCTGGAC
GTTGATGACCGGCGAGTACCCGGCGACGGTGGGCGAGGTGCTGCGCACCCTGTTCGGCGCGGGCCCACCGGGCGCGGAGA
TCATCGTGACGCGGTTCCGGTTGCCCCGGCTGGTGATCGGCATCGGGGTGGGTGCCGCGCTCGGCGTGGCCGGAGCGCTG
TTCCAGAGCCTGTCCCGCAACCCGCTCGGCAGCCCCGACATCATCGGTTTCACCACGGGGTCGGCGACGGGTGCGCTTCT
GGTCATCCTGGTCTTCCCCGACAGTCCGATCGGCACCCCGGCCGGCGCGATCCTCGGCGGGCTCGTCACGGCCCTGCTCG
TGTACGCCCTGGCCTACCGCCGCGGCATGCAGGGGACGCGGCTGATCCTCGTCGGGATCGGGGTGTCCGCGGTCGCCGAG
GCGGTGAACTCCTACCTGCTCAGCCGCTCCTCGCTCGACGCCGCGCAGGAGGCCCAGCGCTGGCTGGTCGGCAGCCTCAA
CGGCCGGAGCTGGGAGTACGCGGGCCCGCTGTGGGCGGCACTCGCCGTCCTGCTGCCGATCACCCTGCTCCTCGCCCGCC
GCATCGAGATCGTGGAGCTGGGGGACGATCTCGCGCTCGCGCTGGGGATCCCGGTCGAGCGGGTGCGCCTGTCGCTGGTG
GTCTGCGGGGTGGCCCTGACCGCGGTGGCCACGGCGGCGGCGGGTCCGATCGCCTTCGTGGCGCTGGCCGCGCCGCAGAC
AGCCCGCCGGTTGGTGCGGGCCGGGACGACGTCCCTGGTGCCCGCCGCGCTGACGGGATCGCTGATCATGGTGGCCGCGG
ACTTCGCCGGGCAGCGGCTGCCGCACGCGATCCAGCTGCCCGTCGGGCTCAGCACCGGCGCGATCGGCGGTCTCTACCTG
ATCTGGCTGCTCAGCGGAGAGCTACGCCGAGGCTGA

Protein sequence :
MSIRVRPRAVVVGVVLAALVLIFGVWTLMTGEYPATVGEVLRTLFGAGPPGAEIIVTRFRLPRLVIGIGVGAALGVAGAL
FQSLSRNPLGSPDIIGFTTGSATGALLVILVFPDSPIGTPAGAILGGLVTALLVYALAYRRGMQGTRLILVGIGVSAVAE
AVNSYLLSRSSLDAAQEAQRWLVGSLNGRSWEYAGPLWAALAVLLPITLLLARRIEIVELGDDLALALGIPVERVRLSLV
VCGVALTAVATAAAGPIAFVALAAPQTARRLVRAGTTSLVPAALTGSLIMVAADFAGQRLPHAIQLPVGLSTGAIGGLYL
IWLLSGELRRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 5e-26 46
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-26 46
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 2e-26 46
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-26 46
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 4e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FRAAL4162 YP_714357.1 iron-siderophore ABC transporter permease VFG0928 Protein 5e-25 46