Gene Information

Name : garL (FRAAL3410)
Accession : YP_713619.1
Strain : Frankia alni ACN14a
Genome accession: NC_008278
Putative virulence/resistance : Unknown
Product : 2-dehydro-3-deoxyglucarate aldolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3836
EC number : 4.1.2.20
Position : 3694318 - 3695181 bp
Length : 864 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
GTGTGGAGCACTGCGATGACGGCGGCCAGCGCGGCGGGGACCGCGGGCGTGACCGGCGGCGCCTTCCGGCGCCGGCTGCG
CGACCCTCGGCCGGCGATCGGCATGTGGGTGGCCACCGGCAACCCCTACAACGCCGAGATCTGCGCCGGGGGCGGCCTGG
ACTGGCTGCTCATCGACGGTGAGCACGCCCCGAACGACGTGCGCAGCTTCCTCGCCCAGCTGCAGGCGGTCGCGCCGTAC
CCGGTCGCCCCGGTCGTGCGCCCCCCGACCGACGACCCCGTGATCATCAAGCAGCTCCTCGACATCGGCGCCGAGAACCT
GCTGCTGCCGATGGTGGAGTCCGCCGAGCAGGCCGCGGCGATCGTCGCGGCCACCCGCTACCCACCCGCCGGCATCCGCG
GTGTCGGTAGCGCGTTCGCCCGGGTGTCCCGGTGGACCCGGGTCGAGGGCTACCTGCACCGCGCCGACGACGAGATCTGC
GTGATGGTCCAGATCGAATCCGCCGCCGGGCTCGCCGAGTGCGCGGCGATCGCGGCCGTCGACGGCGTCGACGGGGTCTT
CTTCGGCCCCGCGGACCTCGCCGCCTCCCTCGGGCATCTGGGCCGTCCCGACCATCCCGACGTCGTCGAGGCGATCACGT
CGGCGGTCGCGGTGGTCAACGCGGCGGGCAAGGCAGCCGGGGTGAACGCGTTCGCCGAGCCGCTGGCGCGGCGCTATCTC
TCCCTCGGCGTCCGGTTCATCCTGGTGGGGGCGGACGTGACCCTGCTGGCGCGCGGCAGCGAGGAGCTCGCCGCGCGCTA
CCGCGACGTCGCGGAGAAGAGCCACTCCACCCCACCCCCGATCTCAGGGAGCGCGACGCTGTGA

Protein sequence :
MWSTAMTAASAAGTAGVTGGAFRRRLRDPRPAIGMWVATGNPYNAEICAGGGLDWLLIDGEHAPNDVRSFLAQLQAVAPY
PVAPVVRPPTDDPVIIKQLLDIGAENLLLPMVESAEQAAAIVAATRYPPAGIRGVGSAFARVSRWTRVEGYLHRADDEIC
VMVQIESAAGLAECAAIAAVDGVDGVFFGPADLAASLGHLGRPDHPDVVEAITSAVAVVNAAGKAAGVNAFAEPLARRYL
SLGVRFILVGADVTLLARGSEELAARYRDVAEKSHSTPPPISGSATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaI AAO17185.1 HpaI Not tested tcd island Protein 1e-48 56