Gene Information

Name : FRAAL1681 (FRAAL1681)
Accession : YP_711923.1
Strain : Frankia alni ACN14a
Genome accession: NC_008278
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1810031 - 1810873 bp
Length : 843 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter

DNA sequence :
TTGCCCGGCGGCCCGGCGGATCGGGAACCCGGGACGGCCGACAGGACCGGCACGGCCGAGGGAACCGGCACGGCCGAGGG
AACCGGGTCGGCCGACGGAAGCGAGTCGGCCGACAGGACCGGGACGGCCGAGGCGGTGCGCATCGACCTGGTCGGCGTCG
GGAAGCGGTACGACGGCCGGGCGACCGGCGTCACGGCGCTCGCGGACGTCACCCTGCGGGTCGGCGCCCGCTGCCTGCTG
GTCATCCTCGGGCCGTCGGGCTGCGGCAAGACGACGCTGCTCAACCTGATCGGCACGCTGGACACCCCCACCACCGGGAC
GGTGCGGCTGGATGGCGTCGACGTCACCCGCGCGTCCCGGCGGATCCGGCGGGAGGCACGCCGCGAGGCGGTCAGCTTCG
TGTTCCAGTCGTTCAACCTGTTCCCGGCGCTCACCGCGCGGGAGAACGTCCGCTTCGGCGCGGACGTCGCCGGGCGGGAC
CGGGCCGGCGAGGTCACCGACGAGGTGCTCGCCGGGGTGGGGCTCGCCGAGCGCGCCGCGCACTTCCCCCACCAGCTCTC
GGGCGGGGAGCAGCAGCGGGTGGCGATCGCCCGCGCCATCGCCACCGGCAACCCGATCCTGCTGGCCGACGAGCCGACCG
GCGAGCTGGACGTCGCCACCGGCGTGCGCATCCTGGAGCTGCTGCGCGGCCAGTCCGCCCAGGGCCGGACCGTTCTCGTC
GTCACCCACAACCGGGAGATCGCCCGGATCGCGGACCGGGTGATCGAGCTGTCCGGCGGGCGGATCGTCCACGACGGACC
GCCGCCCGGCGGCCAGGTGCCGGTGGCGGAGCTGCGCTGGTGA

Protein sequence :
MPGGPADREPGTADRTGTAEGTGTAEGTGSADGSESADRTGTAEAVRIDLVGVGKRYDGRATGVTALADVTLRVGARCLL
VILGPSGCGKTTLLNLIGTLDTPTTGTVRLDGVDVTRASRRIRREARREAVSFVFQSFNLFPALTARENVRFGADVAGRD
RAGEVTDEVLAGVGLAERAAHFPHQLSGGEQQRVAIARAIATGNPILLADEPTGELDVATGVRILELLRGQSAQGRTVLV
VTHNREIARIADRVIELSGGRIVHDGPPPGGQVPVAELRW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FRAAL1681 YP_711923.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-35 47
FRAAL1681 YP_711923.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-26 43