Gene Information

Name : RHA1_ro10151 (RHA1_ro10151)
Accession : YP_708502.1
Strain :
Genome accession: NC_008270
Putative virulence/resistance : Unknown
Product : IS110 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 142922 - 144115 bp
Length : 1194 bp
Strand : -
Note : -

DNA sequence :
ATGGACTCGAACTATGCGGTGTACTGCGGAATCGACGTCGGCAAAGGTGAGCACCACGCCGTCGGACTGACCGCCGCCGG
AAAGAAGATCTACGACAAGGCGTTGCCGAATGACGAGACGAAGCTGCGGGCGGTCTTCGACCGCCTGGCCAGCCACGGAT
CGGTGCTGGTGGTCGTCGACCAACCCAATACGATCGGCGCCCTACCGGTCACCGTGGCCCGCGTAGGCGGCCACGACGTC
GGCTACCTGCCCGGACTGGCGATGCGCCGCATCGCCGACCTGTACCCCGGACAGGCGAAAACAGACGCCCGAGACGCCTT
CATCATCGCCGATACCGCCCGCACCATGCCGCACACCCTGCGCCGCGTCGACACCGGCGACGAGGCCCTCGCCGAACTCG
AGGTCCTCGTCGGATTCGACGACGACCTCGCCGGCGAGGCCACCCGGGTCAGCAACCGCATCCGCGGCCTGCTCACCTCC
ATCCACCCCGCCCTCGAGCGGGTCCTCGGCCCCCGCATCGCCCATCCGGCGGTGCTCGAGATCCTCTCCCGCTGCGGCGG
GCCGACCGGAATCCGGCAGGCCGGCAAGCGCAAGCTCACCGCGATCGCGGTCAAGCACGCACCCCGCATGGGCGCCCGAT
TGGCCACCGACATCCTTGCCGCCCTCGATGAGCAGACCGTGGTGGTGCCCGGCACCGCGGCCGCCGAAACCGTTCTCCCC
AAGCTCGCTGATTCACTGAAAGGGACTCTCCAGCAACGGAAAGCAGTCGCCGAGGACGTGGAGAGGGCGCTCGATGAACA
CCCTCTTTCCCGGGTCCTGACCTCGATGCCCGGCATCGGCGTCAGGACAGCAGCTCGGATCCTGATCGAGGTCGGCGACG
GCTCCGCCTTCGCCTCCGCCGCGCACCTGGCGGCCTATGCCGGCATCGCACCGGTCACCCGTAAATCGGGCTCATCGATA
CGTGGCGAGCACCCGGCCCGATCCGGCAACAAGAAGCTCAAACGAGCGCTGTTCCTGTCCGCGTTCTCCGCCCTCCACGA
CCCCACCAGTCGCGCCTACTACGACAAAAAGCGTGCCGAGAAGAAGAAGCACAACGCGGCCCTGATCTGCCTCGCCCGAC
GCCGCTGCGACGTCCTCTACGCCATGCTCAAGAACAAGGAACTCTACCGGAATCCAACCCCCTCAGCGGCTTGA

Protein sequence :
MDSNYAVYCGIDVGKGEHHAVGLTAAGKKIYDKALPNDETKLRAVFDRLASHGSVLVVVDQPNTIGALPVTVARVGGHDV
GYLPGLAMRRIADLYPGQAKTDARDAFIIADTARTMPHTLRRVDTGDEALAELEVLVGFDDDLAGEATRVSNRIRGLLTS
IHPALERVLGPRIAHPAVLEILSRCGGPTGIRQAGKRKLTAIAVKHAPRMGARLATDILAALDEQTVVVPGTAAAETVLP
KLADSLKGTLQQRKAVAEDVERALDEHPLSRVLTSMPGIGVRTAARILIEVGDGSAFASAAHLAAYAGIAPVTRKSGSSI
RGEHPARSGNKKLKRALFLSAFSALHDPTSRAYYDKKRAEKKKHNAALICLARRRCDVLYAMLKNKELYRNPTPSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 1e-107 64
CDPW8_2181 YP_005143729.1 transposase-like protein Not tested Not named Protein 2e-47 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro10151 YP_708502.1 IS110 family transposase VFG1494 Protein 6e-108 64