Gene Information

Name : aldH1 (RHA1_ro08090)
Accession : YP_707295.1
Strain :
Genome accession: NC_008269
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 88171 - 89676 bp
Length : 1506 bp
Strand : -
Note : -

DNA sequence :
ATGACCTCCACCATCAACCCCACCGCGGGACTGTCTCCCACGGTGGCCGACTTCCTCAGCCGACCGATCGAGCACCTGAT
CGACGGCTCGAACGTGGCCTCGGCCACGGGCGAAACGTTCGCCACGGTCAATCCGTCCACCGGCGCCGCGCTGACACAGG
TCACCCGGGGATCAGCGGAGGATGTCGACCGGGCCGTCGCCGCGGCACGTCAGGCTCTCGACGGCCCGTGGGGCCGGTTG
ACGGCTTCCGCGCGCAGCAAGATCCTCTGGCGGGTCGCCGATCTCATCGAGGACAAGCTCGAGGAGTTCGCGATCCTCGA
GGCCATCGATAGCGGTAAGCCCGTCACCTACGCCCAGTTGGTCGACGTCCCGTTGGCCATCGACTGGTTCCGCTATTTCG
CGGGCTGGCCCACGAAGCTCGAGGGCACCACGATCCCGGTGTCGGCGGTCGCGACTCCGGGCGACTACTTCGCCTACACC
GTGCGCGAGCCGGTCGGTGTGGTCGGGGCGATCATCGCGTGGAACTTTCCGTTGCTGCTGGCCGCCTGGAAGCTGGCGCC
GGCCCTGGCCGCCGGGAACACCGTCGTCCTCAAACCGGCCGAACAGACCCCGCTCAGCGCGGCCCTGCTCGGTGACGTGC
TGCGGGAGGCCGGTGTTCCCGAGGGTGTGGTGAACATCGTGCACGGATACGGCGACCAGGTCGGTGCGGCACTGGCCGCC
CACCCCGGGGTCGACAAGATCTCGTTCACCGGATCCACCGAGGTCGGCCGGCAGATCATCGCCGCGGCCCGCGGGAACCT
GAAGAAGGTCACCCTCGAACTCGGCGGCAAGTCCCCGAACTTGATCTTCGCCGACGCGGACATCGACGCCGCGATCGCCG
GGGCGGCCAATGCGATCTTCTTCAACCAGGGCGAAGCGTGTGAAGCCGGGTCGCGGCTGTTCGTGCAGTCGTCGGTGTAC
GACCGGGTGGTCGCTGGGATCGCCGAGGCCGCGACGCAGATCAAGGTCGGCGACAGCCTGGCCGCGGACACCCAGCTCGG
GCCGTTGGTCTCGCAGCAGCAACTCGACCGGGTGCTCGGATATCTCGTCAGCGGCCGCGCCGAGGGTGCCACCGCCGTCG
CCGGCGGTACCCGCAAGGGCGACACCGGCTACTTCGTCGAACCCACGGTGCTCGTCGACACCAAGCCCAACATGCGGGTG
GTCAAGGAAGAGATCTTCGGGCCCGTCGTCACCGTCGCACCGTTCGACGATGTCGACGATGTGGTACGTAGCGCCAACGA
CACCGATTACGGCCTTGCCGCCGCGGTGTGGACCTCGGATGTGGCCAAGGCCCACAACCTGGCCGCGAAGTTCCGGGCCG
GCACCGTGTGGATCAACAGCTACCACATCCTCGACCCGGCACTGCCGTTCGGCGGCTACAAGCAGTCCGGCTGGGGCCGC
GAACACGGCTCATCCGCCCTCGACGGGTACACCGAAACCAAGACCGTGATCCTCAAGAAGGGATAG

Protein sequence :
MTSTINPTAGLSPTVADFLSRPIEHLIDGSNVASATGETFATVNPSTGAALTQVTRGSAEDVDRAVAAARQALDGPWGRL
TASARSKILWRVADLIEDKLEEFAILEAIDSGKPVTYAQLVDVPLAIDWFRYFAGWPTKLEGTTIPVSAVATPGDYFAYT
VREPVGVVGAIIAWNFPLLLAAWKLAPALAAGNTVVLKPAEQTPLSAALLGDVLREAGVPEGVVNIVHGYGDQVGAALAA
HPGVDKISFTGSTEVGRQIIAAARGNLKKVTLELGGKSPNLIFADADIDAAIAGAANAIFFNQGEACEAGSRLFVQSSVY
DRVVAGIAEAATQIKVGDSLAADTQLGPLVSQQQLDRVLGYLVSGRAEGATAVAGGTRKGDTGYFVEPTVLVDTKPNMRV
VKEEIFGPVVTVAPFDDVDDVVRSANDTDYGLAAAVWTSDVAKAHNLAAKFRAGTVWINSYHILDPALPFGGYKQSGWGR
EHGSSALDGYTETKTVILKKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-72 48
hpaE AAO17179.1 HpaE Not tested tcd island Protein 9e-69 44
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-70 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-75 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-75 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-75 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-75 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-75 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldH1 YP_707295.1 aldehyde dehydrogenase VFG0082 Protein 7e-76 43