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Name : gabD2 (RHA1_ro00822) Accession : YP_700813.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NAD(P)+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 872694 - 874223 bp Length : 1530 bp Strand : + Note : - DNA sequence : ATGCGTGACACACGATCAAAGGAAACCATGACGTACGAAACCATGAAACCCGATGCCGCACTGGCGAAGGTGCCCACCGA CCTGTTCATCGGAGGCAGGTGGGTATCACCCGGAACGGGGCAGACCCTCGCGGTGGAGAACCCCGCCACCGGCGATGTGA TCGCCGAGATCGCCGACGGCGGGCTCGCCGACATGGCCGCCGCTCTCGATGCCGCCGCGGCCGCCCAACGAGACTGGGCG CGCACCGCTCCCCGGACGCGCTCGGACATCCTGCGCCGCGCCTACACACTCATGCTCGAGCGATCCGACTATCTCGCCAC CCTGACGACGCTCGAGATGGGCAAGCCCTACGCCCAGGCGCAGGCCGAGGTGACGTACGCAGCCGAATACCTCCGCTGGT ACTCCGAGGAAGCCGTGCGCATCGGCGGCCGCTACACGGTCACCGAATCGGGGGTCGGCCGGATCGTCACGATGGCCCAG CCAGTCGGCCCGTGCCTGTTCGTCACCCCGTGGAACTTTCCCCTGGCGATGGGCACCCGCAAGATCGGCCCCGCGCTGGC GGCGGGCTGCACCTGCATCGTCAAACCCGCGAAGCAGACTCCGCTGAGCATGCTGGCGACCGCGTCGATCCTGGAGGAGG CCGGGGTTCCCGCCGGAGTGGTCAACATCGTGCCCAGCAGTGACTCGACCCGAGTCGTGGCCGCGGCCATGAATGATCCA CGGCTGCGGAAGATCTCGTTCACCGGCTCGACCGAGGTAGGACAGTCACTGGTCCGGCAATCGGCCGACCAGTTGCTGCG CGTGTCGCTCGAACTCGGCGGCAACGCCCCCTTCATAGTCTTCGACGACGCCGACGTCGGCTCGGCAGTGGACGCCGCGG TACAGGCGAAACTGCGCAACAACGGGGAAGCCTGCACCAGCGCCAACCGCCTGTACGTCCATTCCTCGATCGCCGGCGAC TTTGCTGCCGAACTAGCCGAGCGCTTCTCCGCGCTGACCATCGGCCCGGGCATGGACCCCGGCACCGACATCGGCCCACT CATCGACGACAAGCAACGACGCCAGGTGCAGAGGCTGGTCGACGACGCCGTCGCCAAGGGCGCACGCGTCGTGACGGGTG GGAACCCCCTCGACCGTCCGGGCTGTTTCTTCGCGCCCACCGTCCTCACCGAAGTTCCCGGTGACGCGCTCCTGATGCAG GAAGAGATCTTCGGCCCCGTCGCGCCGATCATCTCCTTCGACGACGAACCCGCGGTCCTCGAATCCGCGAACTCGAGTCG GTACGGGCTCGCTGCCTACGTGTTCACCCGCGACCTGGACCGCGCGATCCGCGTCGCCGAACAACTCGACAGCGGAATGG TCGCGATCAACCAGGGAACGGTGTCGAACCCGGCAGCACCGTTCGGCGGTGTCAAACATTCCGGCTACGGGCGGGAAGGC GGCCCGGAAGGCCTCGCCGAATACCTCGAGACGAAGTACGTCGCGCTGGGCGCGGGCACCGCACCCACGAGTACCGGAGG CATGGCATGA Protein sequence : MRDTRSKETMTYETMKPDAALAKVPTDLFIGGRWVSPGTGQTLAVENPATGDVIAEIADGGLADMAAALDAAAAAQRDWA RTAPRTRSDILRRAYTLMLERSDYLATLTTLEMGKPYAQAQAEVTYAAEYLRWYSEEAVRIGGRYTVTESGVGRIVTMAQ PVGPCLFVTPWNFPLAMGTRKIGPALAAGCTCIVKPAKQTPLSMLATASILEEAGVPAGVVNIVPSSDSTRVVAAAMNDP RLRKISFTGSTEVGQSLVRQSADQLLRVSLELGGNAPFIVFDDADVGSAVDAAVQAKLRNNGEACTSANRLYVHSSIAGD FAAELAERFSALTIGPGMDPGTDIGPLIDDKQRRQVQRLVDDAVAKGARVVTGGNPLDRPGCFFAPTVLTEVPGDALLMQ EEIFGPVAPIISFDDEPAVLESANSSRYGLAAYVFTRDLDRAIRVAEQLDSGMVAINQGTVSNPAAPFGGVKHSGYGREG GPEGLAEYLETKYVALGAGTAPTSTGGMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-94 | 47 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-100 | 46 |
