Gene Information

Name : RHA1_ro00074 (RHA1_ro00074)
Accession : YP_700068.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : response regulator, two-component system
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 82670 - 83347 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
GTGCGAGTTCTTCTGGTCGAGGACGAACGGCGTCTCGCCGAGACGGTGCGCCGTGGACTGACGGCCGAGGGGTTCGTCGT
CGACGTCGAGCACGACGGCCTGTCGGGTTTCGAGGCGGCGCTGAGCGGCGACTTCGACGTGGTCGTCCTCGACATCATGC
TGCCCGGGAAACACGGGTATGACATCGTACGGGACCTGCGGCGTCGTGAAGTGTGGACTCCGGTGCTGATGTTGTCGGCC
AAGGACGGCGAATACGACCTGGCGGACGCGTTCGACCTCGGCGCCGACGACTATCTGATCAAACCGTTCTCGTTCGTGGT
GCTGGTGGCCCGGCTGCGGGCGCTGGTCCGCCGCGGCGCACCGCGGCGTCCCACCGTCCTGACGGCGGACGGCCTGGAGC
TGGACCCCGCCCGGCATCGGGTCACCCGGGACGGCACCGCGCTCGCGCTGACGCCCCGCGAATACAGCGTCCTGGAGTTC
TTGATGCGGAACGCCGGATCCGCGGTCACCAAGCAGGAGATTCTGCAGTCGGTGTGGGACACCCACTACGAGGGCGACGA
CAACATCGTCGAGGTGTACATCGGTTATCTGCGACGCAAGGTGGATACCCCGTTCGGCAGAAACAGCATCGACACCGTGC
GCGGGGTCGGTTACCGGCTGAAGTCCGGAGACGACTGA

Protein sequence : 
MRVLLVEDERRLAETVRRGLTAEGFVVDVEHDGLSGFEAALSGDFDVVVLDIMLPGKHGYDIVRDLRRREVWTPVLMLSA
KDGEYDLADAFDLGADDYLIKPFSFVVLVARLRALVRRGAPRRPTVLTADGLELDPARHRVTRDGTALALTPREYSVLEF
LMRNAGSAVTKQEILQSVWDTHYEGDDNIVEVYIGYLRRKVDTPFGRNSIDTVRGVGYRLKSGDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-31 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro00074 YP_700068.1 response regulator, two-component system BAC0125 Protein 5e-31 44
RHA1_ro00074 YP_700068.1 response regulator, two-component system BAC0197 Protein 3e-31 44
RHA1_ro00074 YP_700068.1 response regulator, two-component system AE015929.1.gene1106. Protein 2e-23 42
RHA1_ro00074 YP_700068.1 response regulator, two-component system Y16952.3.orf35.gene. Protein 2e-18 42
RHA1_ro00074 YP_700068.1 response regulator, two-component system BAC0111 Protein 1e-32 41
RHA1_ro00074 YP_700068.1 response regulator, two-component system U82965.2.orf14.gene. Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro00074 YP_700068.1 response regulator, two-component system VFG0596 Protein 9e-32 42