Gene Information

Name : RHA1_ro07270 (RHA1_ro07270)
Accession : YP_707192.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : metal ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 7779975 - 7780712 bp
Length : 738 bp
Strand : -
Note : tc: 3.A.1.15

DNA sequence : 
ATGACCACCCAGCCGACCGTCGAGGTACAGGACGTCACCGTCCACTACGGCGATGTCCTTGCGCTCGACCAGGTCTCACT
TGCCCTGCAGCCCGGACGCGTCTGTGGCCTCGTCGGCATGAACGGTTCCGGAAAGTCCACTCTGTTCAAGACGATCATGG
GCACGGTCAAACCCGACTCCGGCACGGTCCGCATCAACGGCACGGCGCCGGTCGCGGCACGCAAGACCGGTGTGCTGGGT
TACGTTCCGCAGAGCGAGGACGTGGACTGGACGTTCCCGCTCTCGGTGCGTGACGTGGTGATGACCGGCCGCTACGGGCA
CATGGGGCTGACCCGGCGTCCCGGCAGCGCTGACCGCGAGGCCGTCGACCACGCCCTCGAACGCGTCGAACTGACCGAAC
TGGCGGACCGGCAGATCGGGCAACTGTCCGGCGGCCAGAAGAAACGCACCTTCGTCGCCCGCGGAATCGCACAGGGCGCC
ACCATCCTTCTCCTCGACGAACCGTTCGCCGGGGTCGACAAACGCTCCGAGGCCACCATCACCGCACTGCTGCGTGAACT
CGCCGCCGCGGGTGCGGCGATCCTGGTCTCCACTCACGACCTGCACGCGCTGCCCACCCTGGCCGACGAGGCGATCCTGC
TGATGCGCACCGTCCTCATGCACGGCGACCCGACGGTCGTGCTGCAACCGGAGAACCTGGCGGCCGCCTTCGGCCTCGAC
GTCATGACAAGGACCTGA

Protein sequence : 
MTTQPTVEVQDVTVHYGDVLALDQVSLALQPGRVCGLVGMNGSGKSTLFKTIMGTVKPDSGTVRINGTAPVAARKTGVLG
YVPQSEDVDWTFPLSVRDVVMTGRYGHMGLTRRPGSADREAVDHALERVELTELADRQIGQLSGGQKKRTFVARGIAQGA
TILLLDEPFAGVDKRSEATITALLRELAAAGAAILVSTHDLHALPTLADEAILLMRTVLMHGDPTVVLQPENLAAAFGLD
VMTRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-45 49
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-45 49
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-45 49
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-45 49
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-45 49
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-34 41
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro07270 YP_707192.1 metal ABC transporter ATP-binding protein BAC0440 Protein 4e-50 50
RHA1_ro07270 YP_707192.1 metal ABC transporter ATP-binding protein BAC0350 Protein 6e-46 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro07270 YP_707192.1 metal ABC transporter ATP-binding protein VFG0526 Protein 6e-46 49