|
Name : RHA1_ro06884 (RHA1_ro06884) Accession : YP_706808.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 7398107 - 7399009 bp Length : 903 bp Strand : + Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : GTGAGCACCCCCGACACCACCCCCACCACCGGTACGGCACGCGTCAAGCGTGGCATGGCCGAGATGTTGAAGGGCGGGGT CATCATGGACGTCGTCACCCCCGATCAGGCGAAGATCGCCGAGGATGCCGGTGCGGTCGCGGTGATGGCGCTCGAGCGGG TGCCCGCGGACATCCGGGCGCAGGGTGGGGTGTCCCGGATGAGTGATCCGGACATGATCGACGGCATCATCTCCGCGGTG TCGATCCCGGTGATGGCCAAGGCCCGGATCGGGCACTTCGTGGAGGCGCAGATCCTGCAGTCCCTCGGGGTCGATTACGT CGACGAGTCGGAGGTGCTGACCCCGGCCGACTACGCCAATCACATCGACAAGTGGCAGTTCACCGTCCCGTTCGTGTGTG GTGCCACCAATCTCGGTGAGGCGCTGCGGCGGATCACCGAGGGTGCGGCGATGATCCGGTCCAAGGGGGAGGCCGGTACC GGTGACGTGTCGAACGCGACCACGCACATGCGGACGATCGGTGGGGAGATCCGCCGGTTGACCTCGCTCAGCGAGGACGA GCTGTATGTGGCGGCGAAGGAGTTGCAGGCGCCGTACGATCTGGTCGTCGAGGTCGCCAAGGCCGGGAAGTTGCCGGTCA CGATGTTCACTGCCGGTGGCATCGCCACCCCGGCGGATGCGGCGATGATGATGCAGCTCGGTGCGGAGGGTGTGTTCGTC GGGTCGGGGATCTTCAAGTCGGGTAACCCGGCGGAGCGGGCCGCGGCGATCGTGAAGGCGACCACGTTCTTCGACGACCC GGATGTGCTGGCGAAGGTTTCCCGTGGGCTGGGTGAGGCGATGGTCGGGATCAACGTCGACGACATCCCCGTCCCGCACC GGCTCGCCGAACGCGGCTGGTGA Protein sequence : MSTPDTTPTTGTARVKRGMAEMLKGGVIMDVVTPDQAKIAEDAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGIISAV SIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYANHIDKWQFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGT GDVSNATTHMRTIGGEIRRLTSLSEDELYVAAKELQAPYDLVVEVAKAGKLPVTMFTAGGIATPADAAMMMQLGAEGVFV GSGIFKSGNPAERAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDDIPVPHRLAERGW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 4e-115 | 84 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 6e-115 | 84 |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 6e-115 | 83 |
