Gene Information

Name : RHA1_ro06048 (RHA1_ro06048)
Accession : YP_705983.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Resistance
Product : lipoprotein ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6506314 - 6507168 bp
Length : 855 bp
Strand : +
Note : tc: 3.A.1.125

DNA sequence :
ATGGAGGAGTGCGCCGCGCGTGCACCGTCCCGGCCCGTCACCACGGGGCCGGACCGCACAAGAGAAATACGAAAGGCGAT
CATGAGCACGCATGCCCCCGCTGTCGCTGCCCGTGCTGTCGAGCTGTCCAAGACGTACGGCACCGGCGACACCCAGGTCC
ACGCGCTCAGCGCGGTATCCGCGGAGTTCGCCCGTGGTGAGTTCACCGCGATCATGGGACCGTCCGGTTCCGGTAAGTCG
ACGCTGATGCACTGCCTGGCCGGTCTCGATGCAGCCAGTTCGGGTTCCGTCCTCATCGGCGACACCGAGTTGACGACCCT
GACGGACAAGCAGATGACGCAGCTGCGACGTGACCGGATCGGCTTCGTGTTCCAGGCGTTCAACCTGGTGCCGACGCTGA
CGGCACTGGAGAACATCACCCTTCCGCTGGACATCGCGGGCCGCAAGCCGGACGCCGCATGGCTCGAGAACGTGCTCACC
AAGCTCGGACTGCAGGACCGTCTCGAGCACCGCCCCGGCGAGTTGTCCGGCGGTCAGCAACAGCGCGTCGCGTGCGCGCG
CGCCCTGGCCGGGCAGCCGGAGATCATCTTCGGTGACGAGCCCACCGGCAACCTCGACTCCAAGTCCTCGGGTGAGGTGC
TGTCGATCCTGCGGGCCGCGGTGGACGAGTTCCATCAGACCGTCGTCATCGTCACGCACGATCCCCGCGCGGCGGCCTAC
GCCGACCGGGTGGTCTTCCTCGCCGACGGCAAGATCGTCGACGAACTGCGTGACCCGACGGCCGATTCGGTCCTCGACAC
CATGAAGCGACTCGACGAGCCCGCTCACGCCCTCGCGTCCGACGCGGCGGTCTGA

Protein sequence :
MEECAARAPSRPVTTGPDRTREIRKAIMSTHAPAVAARAVELSKTYGTGDTQVHALSAVSAEFARGEFTAIMGPSGSGKS
TLMHCLAGLDAASSGSVLIGDTELTTLTDKQMTQLRRDRIGFVFQAFNLVPTLTALENITLPLDIAGRKPDAAWLENVLT
KLGLQDRLEHRPGELSGGQQQRVACARALAGQPEIIFGDEPTGNLDSKSSGEVLSILRAAVDEFHQTVVIVTHDPRAAAY
ADRVVFLADGKIVDELRDPTADSVLDTMKRLDEPAHALASDAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-40 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro06048 YP_705983.1 lipoprotein ABC transporter ATPase NC_008702.1.4606598. Protein 8e-41 48
RHA1_ro06048 YP_705983.1 lipoprotein ABC transporter ATPase CP001581.1.gene598.p Protein 9e-52 47
RHA1_ro06048 YP_705983.1 lipoprotein ABC transporter ATPase CP001581.1.gene798.p Protein 4e-46 47
RHA1_ro06048 YP_705983.1 lipoprotein ABC transporter ATPase NC_012469.1.7686878. Protein 4e-42 45