|
Name : RHA1_ro05836 (RHA1_ro05836) Accession : YP_705771.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 6272776 - 6274239 bp Length : 1464 bp Strand : - Note : - DNA sequence : GTGAGCCGAGAGACCACTGCGAACACCAGCGACAAGCTCACCACGGCCGTAGGCGCACCCGTCCCCGACAACCAGAACGT CGTGACCGCCGGGCCCCGCGGGCCGCAGTTGCTGCAGGACGTCTGGTTCCTCGAGAAGCTCGCACATTTCGACCGCGAGG TCATTCCGGAACGCCGCATGCACGCCAAGGGTTCCGGGGCGTACGGAACGTTCACCGTCACGAACGACATCACCCGGTAC ACCAGCGCGAAGATCTTCTCCGAGGTCGGCAAGAAGACCGAGCTGTTCGCCCGCTTCTCCACCGTCGCCGGTGAGCGCGG CGCCGCCGACGCCGAGCGCGACATCCGCGGCTTCGCGGTCAAGTTCTATACCGAGGAAGGCAACTGGGACCTCGTCGGCA ACAACACCCCGGTCTTCTTCTTCCGCGACCCGCTGAAGTTCCCCGACCTCAACCACGCCGTCAAGCGCGACCCCCGAACG AATCTCCGCAGCCCCGACAACAATTGGGACTTCTGGACGTCGCTGCCCGAGTCGCTGCACCAGGTCACCATCGTGATGAG TGACCGCGGCATCCCCTCGTCGTACCGGCACATGCACGGATTCGGTTCGCACACCTTCAGTTTCATCAACACCGAGGGCG AACGCTTCTGGGTGAAGTTCCACCACCGCGTGCAGCAGGGTGTCGAAAACCTCACCGACGCCGAGGCCGAGGCCCTGGTC GGCGCCGACCGCGAGAGCCACCAGCGGGACCTCTTCGACGCCATCGAGGCCGGCAATTTCCCGAAGTGGAAGCTGTGCGT GCAGATCATGCCCGAGGCCGACGCCGACACGGTCCCCTACCACCCGTTCGACCTGACGAAGGTGTGGCCGAAGGCCGACT ACCCGCTCATCGAGGTCGGCGAATGGGAACTCAACCGCAACCCCGACAACTACTTCGCCGAGGTCGAGCAGGCGGCGTTC AACCCGGCGCACGTCGTGCCCGGCATCAGCTTCTCCCCGGACAAGATGCTCCAGGGCCGGTTGTTCTCCTACGGTGACGC GCAGCGCTACCGCCTCGGTGTGAACAACTACCAGATCCCGGTCAATGCGGCCCGGTGCCCGGTGAGCAACTTCCACCGCG ACGGTGCCATGCGGGTCGACGGCAACAACGGTGGCACCCTGCACTACGAACCGAACAGCTACGGCAAGTGGCAGGAGCAG AGCCGGTACCGCGATCCCGCGCAGGGCGTGGGCGCGTTCGCCGACCGGTTCAACTTCCGTGAGGACGACGACGACTACTT CTCGCAGCCGCGCGTGTTGTTCAACAACATGAGCGACGAGCAGAAGCAGGTGTTGTTCGAGAACACCGCGCGGGCCATCA ACGGCGCGTCGCAGCAGGTCGTGCAGCGGCACATCGACAACTGCACCCAGTGCGACCCGGCCTACGGCGAGGGCGTCGCG AAGGCGATCTCCGCGCTGGGCTGA Protein sequence : MSRETTANTSDKLTTAVGAPVPDNQNVVTAGPRGPQLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTNDITRY TSAKIFSEVGKKTELFARFSTVAGERGAADAERDIRGFAVKFYTEEGNWDLVGNNTPVFFFRDPLKFPDLNHAVKRDPRT NLRSPDNNWDFWTSLPESLHQVTIVMSDRGIPSSYRHMHGFGSHTFSFINTEGERFWVKFHHRVQQGVENLTDAEAEALV GADRESHQRDLFDAIEAGNFPKWKLCVQIMPEADADTVPYHPFDLTKVWPKADYPLIEVGEWELNRNPDNYFAEVEQAAF NPAHVVPGISFSPDKMLQGRLFSYGDAQRYRLGVNNYQIPVNAARCPVSNFHRDGAMRVDGNNGGTLHYEPNSYGKWQEQ SRYRDPAQGVGAFADRFNFREDDDDYFSQPRVLFNNMSDEQKQVLFENTARAINGASQQVVQRHIDNCTQCDPAYGEGVA KAISALG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-164 | 71 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 5e-96 | 45 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-92 | 44 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-92 | 44 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-92 | 44 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-92 | 44 |
