Gene Information

Name : RHA1_ro05622 (RHA1_ro05622)
Accession : YP_705560.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : response regulator (protein-glutamate methylesterase)
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : 3.1.1.61
Position : 6047153 - 6047839 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATTTTGGTGGTCGACGACGATCGCGCCGTGAGGGAGTCCTTACGGCGGTCTCTCAGCTTCAACGGGTACTCGGT
GGAACTGGCCGTCGACGGTATCGATGCTCTCGAGAAAGTGGCGAACGCGCGCCCCGACGCGATCGTGCTCGATGTGATGA
TGCCGCGCCTGGACGGTCTCGAGGTGTGCCGTCGGCTGCGGAGCACCGGCGACGACCTGCCGATTCTCGTCCTCACGGCA
CGCGACTCCGTGTCGGAGCGGGTGTCGGGTCTGGACGCCGGAGCCGATGACTACCTGCCCAAACCCTTCGCTCTCGAGGA
ATTGCTGGCCCGGCTGCGCGCACTACTGCGCCGCGCCGCGCCGGAGCCGGGCATCGACTCGGAGAAGATGACGTTCGAGG
ACCTCACGCTCGACCCGGTCACCCGCGAGGTGACGCGTGGCGAGCGGTCCATCAGCCTCACCCGCACCGAGTTCTCGCTT
CTCGAGATGCTGATGGCCAACCCGCGCCGGGTGCTGACCCGCGGCCGCATCCTCGAGGAGGTGTGGGGTTACGACTTCCC
GACGTCCGGCAACGCGCTGGAGGTCTACGTCGGGTATCTGCGTCGCAAGACGGAGGCGGACGGAGAGACCCGCCTGTTGC
ACACCGTCCGCGGAGTCGGCTACGTGCTGCGGGAGACTCCTCCGTGA

Protein sequence : 
MRILVVDDDRAVRESLRRSLSFNGYSVELAVDGIDALEKVANARPDAIVLDVMMPRLDGLEVCRRLRSTGDDLPILVLTA
RDSVSERVSGLDAGADDYLPKPFALEELLARLRALLRRAAPEPGIDSEKMTFEDLTLDPVTREVTRGERSISLTRTEFSL
LEMLMANPRRVLTRGRILEEVWGYDFPTSGNALEVYVGYLRRKTEADGETRLLHTVRGVGYVLRETPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-32 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) HE999704.1.gene1528. Protein 1e-37 46
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) BAC0125 Protein 7e-34 45
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) AE000516.2.gene3505. Protein 2e-33 45
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) BAC0308 Protein 1e-32 44
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) BAC0638 Protein 2e-28 44
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) BAC0083 Protein 7e-35 42
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_002952.2859858.p0 Protein 4e-33 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_007622.3794948.p0 Protein 4e-33 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_003923.1003417.p0 Protein 4e-33 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_013450.8614146.p0 Protein 4e-33 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_002951.3238224.p0 Protein 4e-33 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_007793.3914065.p0 Protein 4e-33 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_002758.1121390.p0 Protein 4e-33 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_010079.5776364.p0 Protein 4e-33 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) NC_012469.1.7686381. Protein 1e-32 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) BAC0197 Protein 7e-29 41
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) U82965.2.orf14.gene. Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) VFG1390 Protein 3e-83 86
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) VFG1389 Protein 1e-43 52
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) VFG1386 Protein 5e-45 47
RHA1_ro05622 YP_705560.1 response regulator (protein-glutamate methylesterase) VFG0596 Protein 3e-32 42