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Name : gabD5 (RHA1_ro05596) Accession : YP_705534.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NAD(P)+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 6018823 - 6020277 bp Length : 1455 bp Strand : - Note : - DNA sequence : ATGACTGATTTCGAACGGCTCCGCGCCACCCTGCCCACCGGACTGTGGATCGACGGTGCCCAGACCGACCCGATCGACGG CGGCACGTTCCCGGTCTACGACCCGGCCACGGGCACTCTCATCGCCGACGTTGCGGATGCGGGTGGCAAGGATGCGATGC GCGCACTGGACTCCGCCGCGGCGGTCCAGGAGGAATGGGCGGCGACCGCGCCGCGGCAGCGGTCGATCATCCTGCGTTCG GCGTGGGAGAAGGTCATCGAGCGCACCGACGACCTCGCGCTGCTGATGACGATGGAGATGGGCAAGGCACTGCCGGAGAG CCGCGGCGAGGTGAACTACGGCGCCGAGTTCCTGCGCTGGTTCAGCGAGGAAGCCGTCCGCATCCAGGGCCGCTACACCA CGTCCCCGTCGGGCAGCGGACGGATCATGGTCACCAAGGTTCCGGTCGGACCCACCCTGGCCGTCACGCCGTGGAACTTC CCCCTCGCGATGGGCACCCGCAAGATCGGCCCCGCGCTCGCCGCAGGCTGCACGATCATCGTCAAGCCCGCCGAGGACAC CCCGCTCACCATGCTGCTGCTCGCCGAGATCTTCGCCGAGGCAGGCCTGCCCGCCGGTGTGCTGTCGGTGCTGCCCGCGT CGAACGCCGCCGCCGTCACCGAACCGCTGCTCGCAGATCCGCGGCTGCGGAAGGTGACGTTCACCGGATCCACCCGGGTC GGCAAGATCCTCATCGAGCAGTCCGCACAGCAGGTGCTGCGCACGTCGATGGAACTCGGCGGCAACGCCCCGTTCGTGGT GTTCGACGACGCCGACATCGACGCCGCGGTCGAGGGCGCGATGGCCGCGAAGATGCGCAACGGCGGCGAGGCCTGCACCG CCGCCAACCGACTGATCGTGGCCAACTCGGTGCGCGAGGAGTTCACCACCAAGCTCACCGACCGGATCGCCGCGCTCACC GTCGGACCGGGCAGCGAGGAAGGAACCAACGTCGGCCCCCTCGTCAACGAGAAGCAGCGCCGCAACGTGGCGTCCCTCGT CGACGACGCCGTCGCCGCGGGCGCCCGGGTCCGCACCGGCGGCAAGTCCGTCGACGGTCCCGGTTACTTCTTCCAGCCCA CCGTCCTCGACGAGGTGCCCGCGAACGCGCGCATCGTCCGCGAGGAGATCTTCGGACCCGTCGCCGCGATCACCGGTTTC GACACCGAGGCCGAGGGCGTCGCCGCCGCGAACGACACCGAATACGGTCTCGCCGCGTACATCTACACGCAGAACGTCGA CCGTGCGTTCCGCGTCGCCGACAAGCTCGAGAGCGGCATGGTCGGCGTCAACCGCGGAGTGATCTCCGACGTCGCCGCGC CGTTCGGTGGAGTCAAGCAGTCCGGCCTCGGCAGCGAAGGCGGCACCGAAGGCATCGAGGAGTACCTCGAGACCAAGTAC GTCGGCTTCGCGTAA Protein sequence : MTDFERLRATLPTGLWIDGAQTDPIDGGTFPVYDPATGTLIADVADAGGKDAMRALDSAAAVQEEWAATAPRQRSIILRS AWEKVIERTDDLALLMTMEMGKALPESRGEVNYGAEFLRWFSEEAVRIQGRYTTSPSGSGRIMVTKVPVGPTLAVTPWNF PLAMGTRKIGPALAAGCTIIVKPAEDTPLTMLLLAEIFAEAGLPAGVLSVLPASNAAAVTEPLLADPRLRKVTFTGSTRV GKILIEQSAQQVLRTSMELGGNAPFVVFDDADIDAAVEGAMAAKMRNGGEACTAANRLIVANSVREEFTTKLTDRIAALT VGPGSEEGTNVGPLVNEKQRRNVASLVDDAVAAGARVRTGGKSVDGPGYFFQPTVLDEVPANARIVREEIFGPVAAITGF DTEAEGVAAANDTEYGLAAYIYTQNVDRAFRVADKLESGMVGVNRGVISDVAAPFGGVKQSGLGSEGGTEGIEEYLETKY VGFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-94 | 50 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-90 | 48 |
