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Name : gabD4 (RHA1_ro05568) Accession : YP_705506.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NAD(P)+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 5987839 - 5989305 bp Length : 1467 bp Strand : + Note : - DNA sequence : ATGATGGACGTCATGGATGCTGTCGAACTCATGCGAACCGTTCCCACAACCCTCTTCCTCGGCGGCGAGAAGCGTGACGC CGAGAACGGCGCCACGTTCACCGTTTTCGACCCCGCCACCGGTGACGCCCTCACCGAGGTCGCGGACGCCAGCCCCGCCG ACGCGATGAAAGCGCTCGACGCCGCGGTCGCGGTGCAGCGGGAGTGGGCGGCGACGCCGGCACGTGAGCGCGGGGAACTG CTCCGCGCGGTGTTCGAGAAGATCACGGCCCGGGCCGACGACTTCGCGCTGCTGATGACCCTGGAGATGGGCAAGGCGCT GCCGGAGAGCGCGGCGGAGGTCAAGTACGGCGCCGAGTTCTTCCGGTGGTTCAGCGAGGAGGCCGTGCGTATCGCCGGCC GCTACACACCGGCACCCGCGGGGAACGGACGCATCCTGGTGACCAAGCAGCCCGTCGGGCCGTGTCTGGCCATCACACCG TGGAACTTCCCGCTCGCGATGGGCACCCGCAAGATCGGTCCCGCACTGGCCGCCGGCTGCACGATGATCGTCAAACCTGC CTCGGAGACTCCGTTGACGATGCTCCTGCTCGCCGAGGTGATGGCCGACGCGGGGCTCCCGAAGGGCGTGCTGTCCGTGC TGCCGACGTCGAAGTCGGGGGAGGTGACCGGTCCGCTGCTCGACGACCCCCGGCTGCGGAAGCTCACGTTCACCGGCTCG ACCGGGGTCGGCCGGATGCTCGTCGAGAAGTCGGCGAAGGGGCTGCTGCGCACGTCCATGGAACTCGGTGGGAACGCGCC GTTCGTGGTCTTCGACGACGCCGACGTGGACAAGGCGGTGGCCGGCGCCGTCCTCGCCAAGATGCGCAACGGCGGCGAGG CCTGCACCGCGGCCAATCGCTTCCACGTCGCCAACAGTGTGCGGGAGGAGTTCACCGCGAAGCTCGTCGACAAGCTGTCT TCGTACACGCTCGGACCCGGCACGGATCCCGGCACGACGCTCGGCCCGCTGATCAATGCGGATCAACTCGAGAAGGTCGG GGAACTGGTGCAGGACGCCGTCGGCGCCGGTGCCCGGGTGCGGCTCGGCGGGGTCGCACCGGAAGGTCCCGGTTACTTCT ACCCGGCGACCGTGCTGGACGAGATCCCCGCGCAGGCTCGGATCCTGAAGGAGGAGGTGTTCGGTCCGGTGGTCGCGATC GCCGGGTTCGACACCGAGGAGGAGGGCATCGCCGCGGCCAACGACACGGAGTTCGGCCTGGCGTCGTACATCTTCACCCG GGATCTGGACCGTGCACTCCGTGTGGCCGACGCCCTCGAATCGGGCATGGTCGGCATCAACCGGGGAGTCATCTCGGACA CCGCTGCCCCCTTCGGCGGCGTCAAAGCGTCAGGCTTCGGGCGCGAAGGGGGCAGTGAAGGCATCGAGGAGTACCTGGAG ACCAAGTACGTGGCACTCGAGCCGTAG Protein sequence : MMDVMDAVELMRTVPTTLFLGGEKRDAENGATFTVFDPATGDALTEVADASPADAMKALDAAVAVQREWAATPARERGEL LRAVFEKITARADDFALLMTLEMGKALPESAAEVKYGAEFFRWFSEEAVRIAGRYTPAPAGNGRILVTKQPVGPCLAITP WNFPLAMGTRKIGPALAAGCTMIVKPASETPLTMLLLAEVMADAGLPKGVLSVLPTSKSGEVTGPLLDDPRLRKLTFTGS TGVGRMLVEKSAKGLLRTSMELGGNAPFVVFDDADVDKAVAGAVLAKMRNGGEACTAANRFHVANSVREEFTAKLVDKLS SYTLGPGTDPGTTLGPLINADQLEKVGELVQDAVGAGARVRLGGVAPEGPGYFYPATVLDEIPAQARILKEEVFGPVVAI AGFDTEEEGIAAANDTEFGLASYIFTRDLDRALRVADALESGMVGINRGVISDTAAPFGGVKASGFGREGGSEGIEEYLE TKYVALEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-99 | 49 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-82 | 47 |
