Gene Information

Name : RHA1_ro04956 (RHA1_ro04956)
Accession : YP_704895.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 5229422 - 5230156 bp
Length : 735 bp
Strand : +
Note : tc: 3.A.1

DNA sequence : 
ATGGCGCAAGACGCTCGCCGGCTAGAACCCGCCGCCGTGCAGGTGCGATCCCTCGTCCGCGGATTCGGCGACAAGACCGT
CCTCGACCGCCTGGACCTCGACATTCCCGAAGGCCAGTTCGTGGCCCTGCTCGGAAAGAGCGGGTCCGGCAAGAGCACGC
TGCTCCGCGCGCTCGCCGGCCTCGACTACGACGTCGAGGGCCGCGGCGGAACCCTCACCGTGCCCGAGGAGGTGTCGGTG
GCATTCCAGGACTCACGGCTGCTGCCGTGGCTGAAGGTGCTGGACAACGTGACGCTCGGACTGGGCCGCACCGGCACGAG
CAGGGGAGCGGCGGCGCTCGCGGAGGTCGGGCTCGCGGGCCGGGAGAAGGCGTGGCCCAGCGAACTGTCCGGCGGTGAAC
AGCAACGGGTGGCGCTGGCCCGAGCGTTGGTCCGCGAGCCCCGACTGTTCCTGGCCGACGAGCCCTTCGGCGCTCTCGAC
GCGCTGACCCGGATCAAGATGCACGCCCTCCTACAGGAGTTGATCCGTCGCCACCGCCCGACCGTCCTGCTCGTCACACA
CGACGTCGACGAAGCGATCGCGCTCGCCGACCGGGTACTCGTTCTCGATCGCGGGCAGATCGTCGTCGACGAGATCATCG
ACATCCCGAAGCCGAGAGCGCTCGGCGACAGCAAGTTCCACGAGTTTCGCACCACGCTGCTCGGCGCCCTCGGCGTCGAG
GTAGCGGCACAGTAA

Protein sequence : 
MAQDARRLEPAAVQVRSLVRGFGDKTVLDRLDLDIPEGQFVALLGKSGSGKSTLLRALAGLDYDVEGRGGTLTVPEEVSV
AFQDSRLLPWLKVLDNVTLGLGRTGTSRGAAALAEVGLAGREKAWPSELSGGEQQRVALARALVREPRLFLADEPFGALD
ALTRIKMHALLQELIRRHRPTVLLVTHDVDEAIALADRVLVLDRGQIVVDEIIDIPKPRALGDSKFHEFRTTLLGALGVE
VAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-28 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-17 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-17 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-17 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-16 41