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Name : clpC2 (RHA1_ro04918) Accession : YP_704857.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Virulence Product : ATP-binding subunit of ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5188018 - 5190441 bp Length : 2424 bp Strand : + Note : - DNA sequence : ATGCCAGCATTCTTCGGGCCGGAGGGCCCAGGTCGCATCGACATCAGTCGGCTCATGAGTCGCTCCACCCAGGAGCTCAT GGCTGCTGCTGCCCGCTTCGCCGCAGGTCGTGGTGATGCGGAACTCGATGCGCTCCACGTTCTGCGCGTCATGACAGAAC ACGAACCCGTCGCGTCTCTGATGCGCCGCGCAGGCGCGAACGCGTCGGCCGTCGCCGACGCAGTCGAACTGCGTCTGCCC CAGGGGCGTGACACCTCAGGCTTTGCAACGCCCGCACTGAGCGGCGCGCTGAAGACGGCGCTGCTCGAGGCGCACCAACT CGCGCGCGCCCTCGGGTCCACCTACATCGATCCCGAGCACCTCTTCCTGGCGCTCGCCGCGGATCAGGACCACGCCGCCG GCCGACTGCTCGCGTCCGAGGGAATCACCCCGGAGCGGCTGCAGACCGCGGTGCAGGGTGGATCGGTGGAGGAGTCGTCG AACTCCGAGACCCCCACGCTCGACAAGTACGGCTTCGACCTCACCGAACGCGCACGCGGCGGCGGAGTCGACCCGGTGAT CGGGCGCGCCGACGAGATCGAGCAGACCATCGAGATCCTGTCGCGCCGCACCAAGAACAACCCCGTGCTGGTCGGTGAGG CCGGCGTCGGCAAGACGGCGGTCGTCGAGGGCCTGGCCCAGCGCATCGTCGACGGCGACGTCCCCGACCGGCTGACGGGT AAGCGCATCGTCCAGCTCGACCTGTCGAGCATGGTGTCGGGCACCCGGTACCGCGGCGACTTCGAGGAACGTCTCAACAA GGTGATCGACGAGATCTCGGCCCACTCGGACGAGCTGATCGTCTTCATCGACGAGGTCCACTCCATCGCCGGTGCCGGTG GCGGCGCCGAGGGTGCGATGGATGCGGGCAACATCCTCAAGCCGAAGCTCGCCCGTGGTGAGCTGCACATCGTCGGTGCG ACGACGCTCGACGAGTACCGCAAGCACATCGAGAAGGATCCGGCGCTCGAACGCCGGTTCCAGCCGGTGACGGTTGCGGA GCCGAGTGTGGAGGATGCGGTGGCGATCCTGTCCGGTCTGCGTGACCGGTACGAGGAGCACCACGGCGTCCGCTACACGG ACGAGGCGATTTCGGCGGCCGTCGAGTTGTCGGCCCGTTACATCGGTGACCGCTTCCTGCCGGACAAGGCGATCGACCTG ATCGATCAGGCCGGGGCCCGGTTGCGGCTGCGGATGCCGAGCGTCGACGTGGATGCTCTGCGGGCGAAGCTCGCGGAACT CGAGCAGGCCAAGGAACAGGCTGTCGCCGACGAGCAGTACGAGAAGGCGTCGCGACTGCGTGACGAGGCCATGGAGGTTC AGGCCCGGATCGACGGGAAGGCGGTCGGCGCGTCCGACACCGCTCCCGAGGTGACCGCCGAGCAGATCGCCGAGGTCGTG TCGCGGGCCACCGGAATCCCGGCCAGCCAGATGACCGAGGAGGAGAAGGAACGGCTCCGCCGGCTCGAGGACGAACTGCA TCGTCGTGTCATCGGCCAGGACGACGCCGTGCGGGCCATAGCCCGGGCGGTGCGCCGCAGCCGTACCGGCATGAGCGATC CGGATCGCCCCGTGGGTAGCTTCCTGTTCCTCGGACCGACCGGTGTCGGTAAGACCGAGCTGGCGAAGGCGCTGGCCGCC ACGCTGTTCGGTGACGAGAACAAGATGCTGCGACTCGACATGAGCGAGTTCGGTGAACGTCACACGGTCAGCCGGCTCGT CGGTGCTCCTCCCGGCTACGTCGGATACGGGGAGGCGGGGCAGCTCACCGAGCAGGTCCGCCGGAACCCGTACTCGGTGA TCCTGCTCGACGAGATCGAGAAGGCGCACCCCGACGTGTTCAACACGCTGCTGCAGGTGCTCGACGACGGTCGGCTCACG GACGGTCAGGGCCGGACGGTGGATTTCAAGAACACCGTTCTGATCATGACCAGCAACCTGGGGTCCGACATCATCTCCAG CAAGTCGGGTGCGCTGGGCTTCAGCACCGGTGACGCGGAGGCTTCGGAGAAGCCGCTGCGGGATCGGGTGATGGGCCGGC TGCGTGAGTCGATGCGTCCGGAGTTCCTGAACCGGATCGACGAGATCGTGATCTTCCGCAAGCTCGACAACGAGCAGCTG CACCGGATCACCGACCTGCTGCTGGATGACAGCCGGAAGCGGCTGCAGTCCAAGGGCATCGAGATCTCGTTCAGCGAGGC CGCGGTCGATTGGATTGCCGAGCACGGACACCAGCCCGAGTTCGGGGCGCGTCCGTTGCGCCGGTCGATCCAGCGGGCCG TCGACGATCGGATCGCCGATCTGTTGCTCGACGACGTCCTCGTCGAGGGTGGCAGCATCGCGGTCGGAGTGTCCGACGAC GAGTTGGATCTCGTAGTCGGCTGA Protein sequence : MPAFFGPEGPGRIDISRLMSRSTQELMAAAARFAAGRGDAELDALHVLRVMTEHEPVASLMRRAGANASAVADAVELRLP QGRDTSGFATPALSGALKTALLEAHQLARALGSTYIDPEHLFLALAADQDHAAGRLLASEGITPERLQTAVQGGSVEESS NSETPTLDKYGFDLTERARGGGVDPVIGRADEIEQTIEILSRRTKNNPVLVGEAGVGKTAVVEGLAQRIVDGDVPDRLTG KRIVQLDLSSMVSGTRYRGDFEERLNKVIDEISAHSDELIVFIDEVHSIAGAGGGAEGAMDAGNILKPKLARGELHIVGA TTLDEYRKHIEKDPALERRFQPVTVAEPSVEDAVAILSGLRDRYEEHHGVRYTDEAISAAVELSARYIGDRFLPDKAIDL IDQAGARLRLRMPSVDVDALRAKLAELEQAKEQAVADEQYEKASRLRDEAMEVQARIDGKAVGASDTAPEVTAEQIAEVV SRATGIPASQMTEEEKERLRRLEDELHRRVIGQDDAVRAIARAVRRSRTGMSDPDRPVGSFLFLGPTGVGKTELAKALAA TLFGDENKMLRLDMSEFGERHTVSRLVGAPPGYVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGRLT DGQGRTVDFKNTVLIMTSNLGSDIISSKSGALGFSTGDAEASEKPLRDRVMGRLRESMRPEFLNRIDEIVIFRKLDNEQL HRITDLLLDDSRKRLQSKGIEISFSEAAVDWIAEHGHQPEFGARPLRRSIQRAVDDRIADLLLDDVLVEGGSIAVGVSDD ELDLVVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-148 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC2 | YP_704857.1 | ATP-binding subunit of ATP-dependent Clp protease | VFG0079 | Protein | 3e-163 | 52 |
| clpC2 | YP_704857.1 | ATP-binding subunit of ATP-dependent Clp protease | VFG0080 | Protein | 2e-142 | 51 |
