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Name : gabD3 (RHA1_ro04543) Accession : YP_704487.1 Strain : Rhodococcus jostii RHA1 Genome accession: NC_008268 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NAD(P)+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 4787475 - 4788923 bp Length : 1449 bp Strand : - Note : - DNA sequence : ATGCTCGAGGAAGCAGCAATCGCATCGGTGCAGACCGGCCTGTTCATCGGCGGCAAGTGGCGCGACAGCGCCCGCACCAT GCCGGTCCACGACCCGTCCAACGGACAGATCCTGTGCACGGTCGCCGACGCCGACGCCGCGGAGGCCCGCGAGGCGCTCG ACGCGGCGGTGGCGGCGCAACCGTCGTGGGCGGCCACGACACCCCGCGAACGCAGCACCATCCTCATGAACGCACACCGA CTTCTGCTCGAGAACGTCGACCGGCTCGCGCTGGTCATGACGCTCGAGATGGGCAAGCCCCTCACCGAGGCTCGGGGTGA AATCGCCTACGCCGCAGAGTTCTTCCGCTGGTTCGCGGAGGAGGCCGTCCGCATCGACGGCGGCTACATGACGGCGCCCG GCGGCGGGTCGCGGTTTCTCGTGACCCGTCAGCCCGTGGGGCCGAGCCTGCTCATCACCCCGTGGAACTTCCCGATGGCG ATGGGCACCCGGAAGATCGGGCCCGCGATCGCCGCCGGGTGCACGTCCGTCATCAAGCCGGCGGCCCAGACGCCGCTGTC GATCCTGGCGCTCGCCGACATCCTCACCGAGGCCGGGCTGCCGGACGGCGTCGTCAACGTCGTCACCACGTCCAGCCCCG ACGAGGTCATCACTCCCCTCATCCTCGACGGCAGGGCCCGCAAGCTGTCGTTCACCGGTTCCACCAAGGTCGGGAAACAT CTGCTCGAACTGTGCGCGCGCACGGTCATGCGCACATCCATGGAACTCGGCGGCAACGCGCCGTTCCTCGTCTTCGACGA CGCGAATCTCGACGACGCCGTCGACGGGGCCATGGCGGCGAAGATGCGCAACATCGGCCAGGCCTGCACAGCTGCCAACC GAATCCTCGTGCACAGTTCGGTCGCCGAAGAATTCACACGCAAACTCACACAGCGGATGGAGGCCCTGCCCGTTGGGCGC GGCACGGAGGACGGCGTCGTGGTCGGACCGCTGATCGACGAGGCGGCCGTCGCGAAGGTGAGCAGTCTCGTCGCGGACGC GGTCGAACGCGGCGCCTCGGTGCTCACCGGCGGCGAGGCACTCGACCGCCCGGGCAACTTCTACCCGGCGACAGTCCTGA CTGGTGTGCCCGACGACGCGGAGATGTGCCACAACGAGATCTTCGGTCCGGTGGCCGCGATCAGCACGTTCGAGACCGAG GCCGAGGCCGTCGAGCGGGCCAACGACACCCCGTACGGGCTGGTGGCCTACGTGTACACCGACAGCCTCAAGCGCGGCAT CCGCGTGTGCGAGGCGCTGGAGTCGGGCATGGTCGGCCTCAACCAGGGTGTGGTGTCGAATCCGGCCGCGCCGTTCGGCG GCGTGAAGGAATCCGGACTCGGGCGCGAAGGCGGAACCACCGGCATCGACGAATTCCTCGAGACGAAGTACATCGGCGTC GCCGTCTAG Protein sequence : MLEEAAIASVQTGLFIGGKWRDSARTMPVHDPSNGQILCTVADADAAEAREALDAAVAAQPSWAATTPRERSTILMNAHR LLLENVDRLALVMTLEMGKPLTEARGEIAYAAEFFRWFAEEAVRIDGGYMTAPGGGSRFLVTRQPVGPSLLITPWNFPMA MGTRKIGPAIAAGCTSVIKPAAQTPLSILALADILTEAGLPDGVVNVVTTSSPDEVITPLILDGRARKLSFTGSTKVGKH LLELCARTVMRTSMELGGNAPFLVFDDANLDDAVDGAMAAKMRNIGQACTAANRILVHSSVAEEFTRKLTQRMEALPVGR GTEDGVVVGPLIDEAAVAKVSSLVADAVERGASVLTGGEALDRPGNFYPATVLTGVPDDAEMCHNEIFGPVAAISTFETE AEAVERANDTPYGLVAYVYTDSLKRGIRVCEALESGMVGLNQGVVSNPAAPFGGVKESGLGREGGTTGIDEFLETKYIGV AV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-92 | 48 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-96 | 48 |
