Gene Information

Name : RHA1_ro04311 (RHA1_ro04311)
Accession : YP_704260.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : iron ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0614
EC number : -
Position : 4541195 - 4542205 bp
Length : 1011 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTCGAGGCTCTACGTACGCGCCGGGCTGGTTGCCCTGGCCACCGTCTTTCTCGCCGCCTGCGGCACCACCGACAC
CGGGTCGTCCGCCGGCAACGCCGACGTCGCCACCGGCGGCCGTCTGTTCGCCACGGCGGACGCCGAGACCGCCAAGCTCG
GCACCGACGCCGAACCGGGCGCCTTCCCCCGGACCATCACCCACGCGCTCGGCGAGACCGTCATCGAGAAGAAGCCCGAA
CGGGTGATCGTCCTCGACGGCGGTGAGCTGGACGACGTGCTCTCCCTGGGCATCACGCCCGTCGGACTGGCCAGCCCCGA
GAGCGCCGCCGGCCAGCCGTCCTACCTCGCCGACAAGCTGGCCGGGGTGCCGGACGTCGGGACCACCAACAACCTGAATC
TCGAGGCGATCTCCGCGCTGCAGCCCGATCTGATCCTGGGCAGCAAGCTGCGCGCCGACAAGCTGTACCCGCAGCTGTCG
TCCATCGCACCGACCGTGTTCGGCATCCGCCCCGGTTTCCCGTGGAAGGAGAACTTCCTGCTGGTCGCCGACGCCCTCGG
TGAGGAGACCAAGGCGGAGGAGGTACTCAACGCCTATCAGACCCGCGCCGACGAGGTCCGGGAGACCATCACGGACGAGC
CGACGATCTCGCTGGTCCGGTTCATGTCCGGCAAGATCCGCCTGTACGGCAACCTGTCGTTCATCGGCGTCATCCTGAAC
GACGTCGGACTTCCGCGTCCGACGGTGCAGAACGTCGACGAACTCGCCGTCGAGGTGAGCCAGGAGACGATCGGTGAGGC
GAACGCCGACCGGATCTTCTACTCCAGCTACGGCGCGCCCGAGACCACCGACGAGTCGACCGTGGTCGGCGGCCCGCTGT
GGAATCAGATGCAGGCGGTGAAGGACGGCAAGGCCGTGCACGTGAGCGACGAGACCTGGTTCCTCGCGCTGGGACCCACC
GGGGCTATGCTCGTCCTCGACGACCTCGAGAACATGCTCGCGGCCGCCTGA

Protein sequence :
MSSRLYVRAGLVALATVFLAACGTTDTGSSAGNADVATGGRLFATADAETAKLGTDAEPGAFPRTITHALGETVIEKKPE
RVIVLDGGELDDVLSLGITPVGLASPESAAGQPSYLADKLAGVPDVGTTNNLNLEAISALQPDLILGSKLRADKLYPQLS
SIAPTVFGIRPGFPWKENFLLVADALGEETKAEEVLNAYQTRADEVRETITDEPTISLVRFMSGKIRLYGNLSFIGVILN
DVGLPRPTVQNVDELAVEVSQETIGEANADRIFYSSYGAPETTDESTVVGGPLWNQMQAVKDGKAVHVSDETWFLALGPT
GAMLVLDDLENMLAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 1e-97 58
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-97 58
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-97 58
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 1e-97 58