Gene Information

Name : RHA1_ro03539 (RHA1_ro03539)
Accession : YP_703500.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Resistance
Product : copper-exporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.4
Position : 3743795 - 3745873 bp
Length : 2079 bp
Strand : +
Note : tc: 3.A.3.5

DNA sequence :
ATGTCTCACGATCATCAGCAGCAGGAAGTGGAACAGGTCCGGGACACCGGGCACGCCGGGCACGGTGAGCACGCGGATCG
GCATGCCGGTCACGGTGCGCAAGGTGAGGTGTTCCGGCAGAAATTCTGGATCAGTCTCGCGCTGTCGGTGCCGGTGGTGG
TGTTCAGCCACATGTTCGCCGACCTCCTCGGCTACACCGTCCCCGACTTCCCCGGTGCGTCGTGGATTCCGCCGGTGGTC
GGCACCGCCATCTTCTTCTACGGCGGCGCGCCGTTCCTCACCGGCGCGTGGGGTGAGCTGAAATCGCGGCGGCCCGGCAT
GATGCTGCTGATCGGCATGGCGATCACGGTTGCGTTCCTCGCGTCGTGGGTGACGACCCTGCAGATCGGCGGGTTCAACC
TCGACTTCTGGTGGGAGCTGGCGCTTCTCATCGTCATCATGCTCCTCGGACACTGGCTGGAGATGCGGGCGCTGGGGTCG
GCGTCCGGTGCCCTCGACGCGCTCGCCGCCCTGCTGCCGGACACCGCCGACAGGGTCACCGACGACGGCATCACCGAGGT
GCCCGTCTCCGAACTCGCCACCGGCGACCTCGTGCTGGTGCGGGCCGGTGGCCGCATCCCGGCCGACGGCACCGTCGAGG
ACGGCCGCGCGGAGGTCGACGAATCGATGATCACCGGCGAATCCAACCCTGTCCCACGGTCGGTCGGCGACACCGTGGTG
GCCGGCACGGTCGCCACCGACAGCGCGCTGCGGATCCAGGTGGGCGCGGTGGGGGAGGACACCGCCCTCGCCGGGATCCA
GCGACTGGTCGCCGACGCGCAGTCGTCCTCGTCCCGGGCGCAGGCCCTCGCCGACCGCGCCGCGGCATTCCTGTTCTACT
TCGCCTCGATTGCAGGGCTTCTCACGTTCGTGGTGTGGTCGCTGCTCGGCAACGTGGACGAGGCCGTGGTGCGGACCGTC
ACCGTTCTGGTGATCGCCTGCCCGCACGCACTCGGCCTGGCGATACCGCTCGTGATCGCCATCTCCACCGAACGCGCCGC
GAAGGCCGGTGTCCTGGTGAAGGACCGGCTGGCGCTCGAACGCATGCGCAACGTCGACGTCGTCCTGTTCGACAAGACCG
GCACCCTCACCCAGGGCAGACACGTCGTCACCGGCGTCGTCACCACCGCGGGTGTCACCGAGGCCGAACTGCTCGCGCTT
GCCGGCGCCGTGGAGGCCGACAGCGAGCACCCGGTCGCCCGGGCCATCGTCGCCGAGGCCGGCGCGAATGTGCCCGGGGA
CGAGCGGCGAACCGCGTCCGACTTCCGGTCACTGCCCGGACGGGGGGTGCGCGCGAACGTCGACGGCACACCCGTCGAGG
TCGGGGGTCCGGCGATGCTCACCGAACTGAACGTCACTGTTCCCGACGACGTTGCCGCGCAGACGACACGGTGGGTCGAA
CGCGGCGCCTCGGTCCTGCACGTGGTCCGCGACGGGCGGGTGCTCGGGGCGCTGGCGCTCGAGGACGCCGTCCGCGAGGA
GTCGAGGCAGGCGATCGACGCCCTGCACGCGCGCGGCGTGAAGGTCGCGATGATCACCGGAGACGCCCGTCAGGTGGCCG
ACGCCGTCGCCGCCGACCTCGGGATCGACGAAGCGTTCGCCGACGTGCTGCCGGAGAACAAGGACGCCGAGGTCGCCGCA
CTCCAGGCACGCGGTCACCGCGTCGCGATGGTCGGCGACGGCGTCAACGACGCGCCCGCACTCGCCCGCGCCGACGTCGG
CGTCGCGATCGGCGCCGGCACCGACGTCGCCATCGAATCGGCGGGTGTCGTCCTCGCCGCCGACGACCCCCGCGCCGTGC
TCTCGATCATCGACCTGTCGCAGGCCAGCTACCGCAAGATGTGGCAGAACCTGGTGTGGGCCACCGGATACAACGTCATC
GCCGTCCCCCTGGCCGCCGGGGTCCTCGCGTTCGCCGGGGTCGCGATCTCACCCGCGGTCGCGGCGATCCTGATGTCCGT
CTCCACCATCGTCGTCGCCCTCAACGCGCAGCTGCTGCGCCGACTCGATCTGGATCCGGAACGGCTGGCGCGGAAGTGA

Protein sequence :
MSHDHQQQEVEQVRDTGHAGHGEHADRHAGHGAQGEVFRQKFWISLALSVPVVVFSHMFADLLGYTVPDFPGASWIPPVV
GTAIFFYGGAPFLTGAWGELKSRRPGMMLLIGMAITVAFLASWVTTLQIGGFNLDFWWELALLIVIMLLGHWLEMRALGS
ASGALDALAALLPDTADRVTDDGITEVPVSELATGDLVLVRAGGRIPADGTVEDGRAEVDESMITGESNPVPRSVGDTVV
AGTVATDSALRIQVGAVGEDTALAGIQRLVADAQSSSSRAQALADRAAAFLFYFASIAGLLTFVVWSLLGNVDEAVVRTV
TVLVIACPHALGLAIPLVIAISTERAAKAGVLVKDRLALERMRNVDVVLFDKTGTLTQGRHVVTGVVTTAGVTEAELLAL
AGAVEADSEHPVARAIVAEAGANVPGDERRTASDFRSLPGRGVRANVDGTPVEVGGPAMLTELNVTVPDDVAAQTTRWVE
RGASVLHVVRDGRVLGALALEDAVREESRQAIDALHARGVKVAMITGDARQVADAVAADLGIDEAFADVLPENKDAEVAA
LQARGHRVAMVGDGVNDAPALARADVGVAIGAGTDVAIESAGVVLAADDPRAVLSIIDLSQASYRKMWQNLVWATGYNVI
AVPLAAGVLAFAGVAISPAVAAILMSVSTIVVALNAQLLRRLDLDPERLARK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-64 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro03539 YP_703500.1 copper-exporting ATPase BAC0629 Protein 9e-105 47
RHA1_ro03539 YP_703500.1 copper-exporting ATPase BAC0101 Protein 9e-69 44
RHA1_ro03539 YP_703500.1 copper-exporting ATPase BAC0079 Protein 1e-101 43
RHA1_ro03539 YP_703500.1 copper-exporting ATPase BAC0183 Protein 7e-61 43