Gene Information

Name : RHA1_ro03141 (RHA1_ro03141)
Accession : YP_703102.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3323358 - 3324065 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAGTGCTGGTCGTCGAGGACGAAGCTCGGTTGGCGAATGTGGTTCGCCGCGGCCTCGAACTCGAGGGGTTCGTGGT
GGTCACCGCCGCTACCGGTGAGGACGGTCTCTGGCACGCCACCGAGGACACCTTCGATGCGATCGTCCTCAACATCATGC
TGCCCGGACTCAACGGATACGAAATTGTCCGTGCACTTCGCGCCAAGCAGATCTGGACCCCGATTTTGATGCTGACCGCC
AAGGACGGCGAGTACGACCAGGCCGACGCGTTCGATCTCGGTGCCGATGACTACCTGGTCAAACCGTTCTCTTTCGTGGT
CCTTGTCGCCCGCTTGCGCGCATTGGTGCGCCGCGCCGCGCCGGCGCGCCCGGTGTTGCTCACCGCGGGTGATCTGAGCC
TCGACCCGGCGCGGCGCCGCGTCATGCGCGGTAACGAAGAGCTGGCCCTGACTCCTCGCGAATTCGGGGTCCTCGAGTTC
CTGTTGCGGAATCCGGACACTGCCCTGACGAAGGGCGAAATTCTGCGCAACGTGTGGGACGCGCACTACGACGGCGACGA
AAATATCGTCGAGGTGTACGTCGGGTATCTCCGCCGGAAGATCGACGCACCCTTCGGCGCGCACACCATCGACACGGTCC
GCGGCGTCGGATATCGGCTCACGACTCGGCCGGAGACACCGGAGTCACCGGAGTCGCCGGAAGGGTGA

Protein sequence : 
MRVLVVEDEARLANVVRRGLELEGFVVVTAATGEDGLWHATEDTFDAIVLNIMLPGLNGYEIVRALRAKQIWTPILMLTA
KDGEYDQADAFDLGADDYLVKPFSFVVLVARLRALVRRAAPARPVLLTAGDLSLDPARRRVMRGNEELALTPREFGVLEF
LLRNPDTALTKGEILRNVWDAHYDGDENIVEVYVGYLRRKIDAPFGAHTIDTVRGVGYRLTTRPETPESPESPEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro03141 YP_703102.1 transcriptional regulator BAC0125 Protein 7e-39 45
RHA1_ro03141 YP_703102.1 transcriptional regulator Y16952.3.orf35.gene. Protein 4e-24 44
RHA1_ro03141 YP_703102.1 transcriptional regulator BAC0111 Protein 1e-33 44
RHA1_ro03141 YP_703102.1 transcriptional regulator BAC0308 Protein 5e-32 43
RHA1_ro03141 YP_703102.1 transcriptional regulator HE999704.1.gene1528. Protein 1e-27 42
RHA1_ro03141 YP_703102.1 transcriptional regulator U82965.2.orf14.gene. Protein 3e-24 42
RHA1_ro03141 YP_703102.1 transcriptional regulator BAC0197 Protein 8e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro03141 YP_703102.1 transcriptional regulator VFG1390 Protein 5e-34 45
RHA1_ro03141 YP_703102.1 transcriptional regulator VFG1386 Protein 1e-31 42
RHA1_ro03141 YP_703102.1 transcriptional regulator VFG0596 Protein 3e-31 41
RHA1_ro03141 YP_703102.1 transcriptional regulator VFG1389 Protein 7e-31 41