Gene Information

Name : RHA1_ro02660 (RHA1_ro02660)
Accession : YP_702623.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 2813945 - 2815471 bp
Length : 1527 bp
Strand : +
Note : -

DNA sequence :
ATGACAGCCATACCGCACTACACCCAGTTCATCGACGGTCAATGGGTCGATACCGACCGCACGTTCGACATCATCGATCC
CGCGAACGGCGAACTGGTCGCCACCGCCGCCCGTGGCTCCGTCGAGAACCTCGACCAGGCGGTCGCCGCCGCCAAAGCTG
CCCACGCCCGGGGTGAGTGGCGCACGAAGACGCCGGACGAACGCGCCGACATCCTGTCGGCGATTGTCGCCGACCTGTCC
GAGCGCATGGAGGAGCTGGTTGCTCTGCACGTCAAGGAGAACGGCGTCACCATCCGCCAGGCGATGGCCTTCCACGTCGG
CTACTCGATCTCGCATCTGCAGTACTTCGCCGACCTGGCCCGCACCTACGAATTCGAGCGGTCAGGGCCGCAATTGTCCT
ACCCGACATTGGCATCCGGGATCGTGCGCCGGGAACCGATCGGTGTGGTCGCCGGCATCGTGCCGTGGAACTTCCCGCTG
CTGCTTGCTGTGTGGAAACTCGGTCCCGCCTTGGCGGCCGGCAACACCATCGTGCTCAAGCCCGACGAGAAGACGCCGCT
CACCCTGCTCGAACTGGCCAAGTCGGCGGAACGGGCCGGGCTGCCGAAAGGTGTCCTCAACATCGTCACCGGTGCCGGCG
AAGAGGTCGGAGCCCGTCTCGCCGCACACCCGGACGTACGCAAAATCGCCTTCACCGGGTCGACGGCGGTCGGCCGGGAG
ATCAGCAAGCTTGCCGCGGAGAACATCAAGAAGGTCACCCTCGAACTCGGCGGCAAGGGACCGAACATCGTGCTCGCCGA
CGCCGACATCGACTCCGCGGTCGACGGGGCACTCTTCGCCTGCTTCCTCTACGCTGGTCAGGCATGCGAGTCGGGAACCC
GGCTGCTGCTGCCCGAGAGCTTGCACGACGAATTCGTCGACCGCCTGGTGCAGCGGGCGGCGACCATCAAGGTCGGCGAC
CCGTCGGAGTTCGACACCGACATCGGTCCGGTCATTTCCGCCGAGCAGCACGCCCGGATTCTCGACTACATCGAAATCGG
CCAGAAGGAGGGCGCAACCCTCGCGTTCGGCGGTGAACCGCCCACCGGAACGCAATTCGAGCAAGGGCACTGGGTGCGCC
CGACGATCTTCACCGACGTCACACCCGACATGCGCATCGCCCGCGAGGAGATCTTCGGTCCCGTCCTGTCGGTTCTGAAG
TACCGCACCGTCGACGAAGCCGTCGCGATCGCCAACGACTCCGAGTACGGATTGTCGGCCGGGGTGTGGAGCGAAGACCT
CGAAGCGGCACTCGTCGTCGCGGCGCGAATCGAGTCGGGCACCGTCTGGATCAACGACTGGCACATGGTCAACGCTCTCT
ACCCCTTCGGTGGTTACAAGCAGAGCGGAAACGGCCGCGAACTCGGACCCCACGCGCTCGACGAGTACACCGAGGAGAAG
TTCGTCCACGTCGACCTCTCGCGCTCCGTCGACCGCAAGGTGTACGACCTTGTCCTGCCCGCGGCCCAGGCGGCGGTGAA
CCGATGA

Protein sequence :
MTAIPHYTQFIDGQWVDTDRTFDIIDPANGELVATAARGSVENLDQAVAAAKAAHARGEWRTKTPDERADILSAIVADLS
ERMEELVALHVKENGVTIRQAMAFHVGYSISHLQYFADLARTYEFERSGPQLSYPTLASGIVRREPIGVVAGIVPWNFPL
LLAVWKLGPALAAGNTIVLKPDEKTPLTLLELAKSAERAGLPKGVLNIVTGAGEEVGARLAAHPDVRKIAFTGSTAVGRE
ISKLAAENIKKVTLELGGKGPNIVLADADIDSAVDGALFACFLYAGQACESGTRLLLPESLHDEFVDRLVQRAATIKVGD
PSEFDTDIGPVISAEQHARILDYIEIGQKEGATLAFGGEPPTGTQFEQGHWVRPTIFTDVTPDMRIAREEIFGPVLSVLK
YRTVDEAVAIANDSEYGLSAGVWSEDLEAALVVAARIESGTVWINDWHMVNALYPFGGYKQSGNGRELGPHALDEYTEEK
FVHVDLSRSVDRKVYDLVLPAAQAAVNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-68 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-75 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro02660 YP_702623.1 aldehyde dehydrogenase VFG0082 Protein 6e-76 41