Gene Information

Name : RHA1_ro02610 (RHA1_ro02610)
Accession : YP_702573.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2769655 - 2771160 bp
Length : 1506 bp
Strand : -
Note : -

DNA sequence :
ATGACTGCAGTCGTTCACACCCCAGCCGGACTCGACCCCCGGGTCGTCGACTTCGTTTCGTCGCCGAAGCGCATGTTCGT
CGACGGCCGATGGGTGGACTCGGCGTCGGGCAGGACGTTCGAGACGGTCGATCCCGCCACCGGACAGGTGATCACGACAG
TGCCGCACGCCGGAATCGAAGACGTGGACCGGGCGGTAGCGGCGGCCCGGCGGGCCTTCGAATCCGGGCCGTGGCGCTCG
CTCACCCCCGCGGAACGTCAGCGGATCCTCTGGAAGATCGGCGAGGGGATCCTGGCCCGGGCCGATCAGTTCGCGCAGCT
CGAGTCGATCGACAACGGCAAGTCCGTGGCGGTGGCGAAGGCCGTCGACGTGACGTGGGCAGCGGAGATCTTCTTCTACT
ACGCCGGCTGGGCCACCAAGATCGAGGGCCGCACCATCCCCGTGTCGGTGCCGTGGGCGCCCGGAGCACGTTTCCACGCC
TTCACCACCCGTGAACCGGTCGGTGTGTGCGCACAGATCATCCCGTGGAACTTCCCGCTGGTGATGGCTGCGTTCAAGGT
GGCGCCCGCGCTGACCTGCTCGAACACCATGATCCTCAAGCCTGCGGAGCAGACCCCGCTCACCGCGTTGCTCCTCGCCG
AGGTGATCGCCGAGGCCGGCGTCCCCGACGGCGTGTTCAACGTGCTCACCGGTTTCGGCGACATCGGCGCGGCGCTGTCG
AGTCACGACGACGTCGACAAGGTCGCGTTCACCGGTTCGACCGAGGTCGGAAAGAAGATCGTCAATGCCGCGTCGGGGAA
CCTGAAGAAGGTGTCCCTCGAACTCGGTGGCAAGAGCCCGCAGGTGATCTTCTCCGACGCCGACCTCGAGGCTGCGATCC
CCGGCGTGGCCGGCGGGTTCCTGTTCAACCACGGCCAGGCCTGCACGGCCGGAACGCGCCTGCTCGTCGAAGACCGGATC
TTCGACGAATTCACCTCCGGTGTAGCCGATTTCGCGAAGTCGCAGAAGATCGGGCCTGGGCTCGACCCCACCAACGACGT
CGGCCCGCTGATCTCCCAGGAGCAGTTGGGCAAGGTCACCGGATACATCGACGCCGGACTCGCCGACGGTGCCCGCGCGC
TCTCCGGTGGGCACCGGCACGGCGACACCGGCTTCTACGTCGAGCCCACCCTGCTGGTCGACGTGAACCGCGACTTCAGC
GTGTACCAGGAGGAGATCTTCGGCCCGGTCGCGGTGGCGGTGCCGTTCAACCGGGAGGAAGGCGTCCGCGCGGCCGCCAA
CGACACCCCCTACGGCCTCGCCGCCAGCGTGTGGACCCGGGACGTGTCCCGCGCCCACGAGGTGGCCGCCGAGATCAAGG
CGGGCACGGTGTGGGTGAACTGCCACAATGCGTTCGACACGGCGCTTCCGTTCGGCGGCTACAAGCAGTCCGGGTGGGGA
CGCGAACTCGGTGAAGGCGCCATCGCCGAATACACCCAGAGCAAGTCCGTCAACATCGCACTCTAG

Protein sequence :
MTAVVHTPAGLDPRVVDFVSSPKRMFVDGRWVDSASGRTFETVDPATGQVITTVPHAGIEDVDRAVAAARRAFESGPWRS
LTPAERQRILWKIGEGILARADQFAQLESIDNGKSVAVAKAVDVTWAAEIFFYYAGWATKIEGRTIPVSVPWAPGARFHA
FTTREPVGVCAQIIPWNFPLVMAAFKVAPALTCSNTMILKPAEQTPLTALLLAEVIAEAGVPDGVFNVLTGFGDIGAALS
SHDDVDKVAFTGSTEVGKKIVNAASGNLKKVSLELGGKSPQVIFSDADLEAAIPGVAGGFLFNHGQACTAGTRLLVEDRI
FDEFTSGVADFAKSQKIGPGLDPTNDVGPLISQEQLGKVTGYIDAGLADGARALSGGHRHGDTGFYVEPTLLVDVNRDFS
VYQEEIFGPVAVAVPFNREEGVRAAANDTPYGLAASVWTRDVSRAHEVAAEIKAGTVWVNCHNAFDTALPFGGYKQSGWG
RELGEGAIAEYTQSKSVNIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 4e-69 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-75 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-74 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-77 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-77 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-77 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro02610 YP_702573.1 aldehyde dehydrogenase VFG0082 Protein 1e-74 41