Gene Information

Name : RHA1_ro02498 (RHA1_ro02498)
Accession : YP_702461.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 2650220 - 2651728 bp
Length : 1509 bp
Strand : -
Note : -

DNA sequence :
ATGACAGCGACGATCGAACCCAGCCAAGCGGAACTCTTGCCGTCGGTACGGAACTTTCTGTCCGGCACCAAGCGATTTCT
CGTCGGAGGGCAGTGGGTGGAATCGGCGAGCGGCGAGACGTTCGAGACGATCGACCCGGCCACCGGGCAGGTGCTGACCA
CCGTCGCACGCGGTGGTGCCGAAGACGTAGACCGCGCGGTCCGGGCCGCTCGTACGGCATTCGACGAGGGCCCGTGGGCC
ACCATGAAGCCCAACGAGCGGGAACGGCTGATCTGGCGGGTCGGCGACATCCTCTCCGAGCGCGCCGAGGAATTCGGTCA
GCTCGAGGCGCTGGACAACGGCAAGTCGGCGGGCATCGCCGCGGCTGTCGACGTCGCCTGGTCGGCCGACATCTTCCGCT
ACTTCGCGGGCTGGGCCACCAAGATCGAGGGCAGCACGGTCAACGTGAGCATGCCGTTCGTCCCCGGCGGCCAGTTCCAT
GCGTACACGCTGCGCGAACCCGTCGGCGTCTGCGGTCTGATCGTTCCCTGGAACTTCCCGCTGCTCATGGCCGCATTCAA
GCTGGCGCCCGCGCTCGCCGCAGGCAACACGGTGATTCTCAAGCCCGCGGAGCAGACCCCGCTCACCGCGATCCTGCTCG
GCGAGGTGTTCGAGGAGGCCGGCTTCCCGCCCGGCGTCGTCAACATCGTCACCGGCTACGGCGACGCCGGCGCGGCATTG
TCCGCCCACGACGACGTCGACAAGATTGCGTTCACCGGCTCCACCGAGGTCGGGAAGAAGATCGTCGACGCCGCCCGGGG
CAACCTCAAGAAGGTGTCGCTCGAACTCGGCGGCAAGAGCGCCAACGTCGTGTTCGCGGACGCCGACTTCGACGCCGCCG
TCACCGGATCGCTCAACGCCTGGCTGTTCAACCACGGCCAGTGCTGCGTCGCAGGCACCCGGATGTTCGTCGAGGACAGC
ATCTTCGACGACTTCACCGCAGCGGTCGCCGAGGCCGCCAGCCAGGTCAAGATCGGCCCCGGACTCGACCCCACCACCCA
GCTCGGACCGCTGGTGTCGCAGGAGCAGTTCGACAAGGTCACCGGCTACCTGGCCGCCGGACTCGCCGACGGCGCCCGCG
CCCTCACCGGCGGAAAGCGCTGGGGCGACACCGGCTTCTATGTCGAGCCGACGGTGTTCGTGGACGTGAAACCCGAGTTC
AGCATCGTGGAGGAGGAGATCTTCGGCCCCGTCGTCGCAGCGCTCCCGTTCAACGCAGAGGAGGGAGTCGCGAAGGCGGC
GAACAGCAGCATCTACGGCCTCGCCGCCGGAATCTGGACCAAGGATCTGTCCAAGGCGCACCTCACGGCCCGTCAGCTCA
AGGCCGGTTCGGTGTGGATCAATCAGTACAACGGGTTCGACACCGCCATGCCGTTCGGCGGATACAAGCAGTCCGGTTGG
GGACGTGAGCTCGGGGCGACCGCCATCGATCTCTACACCCAGACCAAAGCCGTCAACATCGCACTCTGA

Protein sequence :
MTATIEPSQAELLPSVRNFLSGTKRFLVGGQWVESASGETFETIDPATGQVLTTVARGGAEDVDRAVRAARTAFDEGPWA
TMKPNERERLIWRVGDILSERAEEFGQLEALDNGKSAGIAAAVDVAWSADIFRYFAGWATKIEGSTVNVSMPFVPGGQFH
AYTLREPVGVCGLIVPWNFPLLMAAFKLAPALAAGNTVILKPAEQTPLTAILLGEVFEEAGFPPGVVNIVTGYGDAGAAL
SAHDDVDKIAFTGSTEVGKKIVDAARGNLKKVSLELGGKSANVVFADADFDAAVTGSLNAWLFNHGQCCVAGTRMFVEDS
IFDDFTAAVAEAASQVKIGPGLDPTTQLGPLVSQEQFDKVTGYLAAGLADGARALTGGKRWGDTGFYVEPTVFVDVKPEF
SIVEEEIFGPVVAALPFNAEEGVAKAANSSIYGLAAGIWTKDLSKAHLTARQLKAGSVWINQYNGFDTAMPFGGYKQSGW
GRELGATAIDLYTQTKAVNIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-62 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-60 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-63 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-63 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-63 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro02498 YP_702461.1 aldehyde dehydrogenase VFG0082 Protein 1e-60 41