Gene Information

Name : RHA1_ro02301 (RHA1_ro02301)
Accession : YP_702265.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Virulence
Product : response regulator, two-component system
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2426835 - 2427494 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
GTGCAGATCGCGGTGGTCGAGGACGACGACGGAGTCGGCGACGCACTCGTGGAAGCACTGGCCACCCACGGCCACGAGGC
GGTGCGCATGCGGCGCGGTTCCGATCTCCTTCTCGGCCATCGCGGTATGGACGCGGTGATCCTCGACCTCGGTCTCCCCG
ACGCGGACGGCCTGCAGGTGCTCCGGCAGCTGCGGGCCGTCAGCGACGTTCCGGTGGTGATCCTCACCGCCCGCGACGAC
GAACGGTCGGTGGTGCGGGGACTGCGGGGCGGGGCGGACGACTACCTCGTCAAGCCGGCGCGGCTCGCGGAATTGCTGGC
GCGGCTCGACGTCGTGACCCAGCGTCGCCGCGCGACCGCGGCCTCGGCCGCGCAGACGGTCACCGAAGGTGATGTGGTGG
TCGATCTGGCGGCACGCGAAGTGGAGGTCGGCGGAGCTCCGGTGGCGTTGACAGCCAAGGAGTTCGAGCTTCTCGAGGTG
CTCGTCACCCGTCCCGGCGCCGCCGTGAGTCGCCAGCAACTGATGGATGCGGTGTGGGGCGACGCGTACGTGGCGATCTC
ACGCACCCTCGACGTGCACATGACCGGGTTGCGCGCGAAACTGGGCCGGCCGGGGCTCATCTCGACCATCCGCGGGTACG
GCTACCGCTGGGGCACTTGA

Protein sequence : 
MQIAVVEDDDGVGDALVEALATHGHEAVRMRRGSDLLLGHRGMDAVILDLGLPDADGLQVLRQLRAVSDVPVVILTARDD
ERSVVRGLRGGADDYLVKPARLAELLARLDVVTQRRRATAASAAQTVTEGDVVVDLAAREVEVGGAPVALTAKEFELLEV
LVTRPGAAVSRQQLMDAVWGDAYVAISRTLDVHMTGLRAKLGRPGLISTIRGYGYRWGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro02301 YP_702265.1 response regulator, two-component system BAC0487 Protein 1e-21 42
RHA1_ro02301 YP_702265.1 response regulator, two-component system BAC0083 Protein 9e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro02301 YP_702265.1 response regulator, two-component system VFG1389 Protein 2e-23 46
RHA1_ro02301 YP_702265.1 response regulator, two-component system VFG0596 Protein 7e-23 42
RHA1_ro02301 YP_702265.1 response regulator, two-component system VFG1390 Protein 7e-23 41