Gene Information

Name : RHA1_ro00177 (RHA1_ro00177)
Accession : YP_700171.1
Strain : Rhodococcus jostii RHA1
Genome accession: NC_008268
Putative virulence/resistance : Resistance
Product : beta-lactamase, penicillin binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2367
EC number : 3.5.2.6
Position : 236155 - 237108 bp
Length : 954 bp
Strand : +
Note : -

DNA sequence :
ATGTCCACCCACCGAAATCATCCGAAGCCCAGGCGCACCGGTCGCCGAGGTGCCGTCGCCCTCGCGCTGGCTCTGCCCTT
GCTGCTCGGGGCGTGCACGGCCACCGCGGAGCAAGCCCAGCCCACCACATCGGTGGCCGCGATACCGGATCGCCGGTCCC
TCGACGCGACGATCGACGCCCTGGAGGCGCAGTACTCCACGCGGATCGGAGTGACGGCCGTCAATCCCGCGACCGGCGAG
GTCTACAGCCACCGGGGTGACGAACGGTTCGCGATGTGCTCCACGTTCAAGGCCTACGCATCCGCGGCGGTTCTGCGCAA
GACCGAGGACGGGTCGACGTCACTCGACAAGACGGTCGTGATCGAACCCGGCGACCTCGTCGAGAACTCGCCGGTCACCG
CCGCAGCGGTCGGCGCCCCGATGACGTTGGGGCAGATCGCCGAAGCCGCGTTGACGCAGAGCGACAACACCGCCGGGAAC
TACCTGCTCCGGGAGATCGGCGGGCCGCAGGCGATCACCGCCCTCGCCCGGGACGTCGGCGACGGGGGCACACGGCTGGA
CCGGTGGGAGACCGAACTCAACACCGCATTCCGCGACGACCCCCGGGACACGACGACACCGAACGGCCTCGCGCAGGGTT
TCCGGGCGCTGCTCCTCGGAGATGCCCTCGACACGGCGAGCCGCGATCAGCTTCTCGAGTGGATGCGGGCGAGCAAGACG
TCGGACAAGCGAATGCGCGCCGGTCTGCCGACCGGGTGGACTGCCGCCGACAAGACCGGTGGCGGCGGGTTCGGCACCGC
CAACGATGCCGGTGTCGCGTGGAGTCCGGACGGCGCACCCCTCGTCCTCGCCATCCTCACCGACAGCCTCACCAATCAGC
AGGACGCGCAGGGAAACAACCAGGCGATCGCCGACACCACCGCGGCCGTCATCGAAGGCTTGACTGCGCCGTGA

Protein sequence :
MSTHRNHPKPRRTGRRGAVALALALPLLLGACTATAEQAQPTTSVAAIPDRRSLDATIDALEAQYSTRIGVTAVNPATGE
VYSHRGDERFAMCSTFKAYASAAVLRKTEDGSTSLDKTVVIEPGDLVENSPVTAAAVGAPMTLGQIAEAALTQSDNTAGN
YLLREIGGPQAITALARDVGDGGTRLDRWETELNTAFRDDPRDTTTPNGLAQGFRALLLGDALDTASRDQLLEWMRASKT
SDKRMRAGLPTGWTAADKTGGGGFGTANDAGVAWSPDGAPLVLAILTDSLTNQQDAQGNNQAIADTTAAVIEGLTAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaCTX-M2 ACF06162.1 beta-lactamase CTX-M2 Not tested Tn5036-like Protein 1e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY029068.1.gene1.p1 Protein 2e-41 46
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EF581888.1.gene1.p01 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY847147.1.gene1.p01 Protein 4e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY033516.1.gene2.p01 Protein 6e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF325134.1.gene1.p1 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY847146.1.gene1.p01 Protein 3e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF325133.1.gene1.p1 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EU136031.3.gene1.p3 Protein 6e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ214368.1.gene1.p1 Protein 3e-40 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HQ398215.1.gene1.p01 Protein 1e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY847143.1.gene1.p01 Protein 3e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ214369.1.gene1.p1 Protein 1e-40 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HM755448.1.gene1.p01 Protein 5e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY156923.1.gene1.p01 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EU545409.1.gene1.p1 Protein 8e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AJ416345.gene.p01 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY847145.1.gene1.p01 Protein 4e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ214366.1.gene1.p1 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ214367.1.gene1.p1 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ211987.1.gene1.p01 Protein 4e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein JF274243.1.gene1.p01 Protein 1e-40 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF252622.2.gene2.p01 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein JF274247.1.gene1.p01 Protein 1e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HQ833652.1.gene1.p01 Protein 3e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HQ166709.1.gene1.p01 Protein 2e-40 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HQ833651.1.gene1.p01 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HM803271.1.gene1.p01 Protein 5e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY822595.1.gene1.p01 Protein 4e-42 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein JF274246.1.gene1.p01 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY143430.1.gene1.p01 Protein 8e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF174129.3.gene9.p01 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ907381.1.gene1.p01 Protein 5e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EF418608.1.gene1.p01 Protein 2e-40 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF252623.2.gene1.p01 Protein 2e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein JF274242.1.gene1.p01 Protein 7e-41 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ663489.gene.p01 Protein 4e-39 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ328639.gene.p01 Protein 3e-39 45
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ023162.1.gene1.p1 Protein 3e-38 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HM167760.1.gene1.p01 Protein 8e-39 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AB284167.2.gene1.p01 Protein 8e-41 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY847144.1.gene1.p01 Protein 2e-41 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY303807.gene.p01 Protein 4e-38 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein GQ149243.1.gene1.p01 Protein 3e-39 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ102702.1.gene1.p1 Protein 2e-38 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HQ913565.1.gene1.p01 Protein 6e-41 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY005110.1.gene1.p1 Protein 3e-38 44
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF518567.2.gene4.p01 Protein 4e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ873739.1.gene1.p01 Protein 1e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ810789.1.gene1.p01 Protein 4e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF488377.1.gene1.p1 Protein 3e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ061159.1.gene1.p01 Protein 1e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AJ704396.1.gene1.p01 Protein 2e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY267213.1.gene1.p01 Protein 4e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EU402393.1.gene1.p1 Protein 4e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY995206.gene.p01 Protein 2e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein GQ870432.1.gene1.p1 Protein 4e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein JN227085.1.gene1.p01 Protein 1e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AJ557142.gene.p01 Protein 5e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AJ549244.1.gene1.p01 Protein 3e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ971899.1.gene1.p1 Protein 4e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein GQ351346.1.gene1.p01 Protein 2e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ885477.1.gene1.p01 Protein 4e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ268764.2.gene6.p01 Protein 1e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY157676.1.gene1.p01 Protein 6e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY238472.1.gene1.p01 Protein 2e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EF426798.1.gene1.p1 Protein 6e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HQ398214.1.gene1.p01 Protein 3e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY954516.1.gene1.p1 Protein 2e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EF210159.1.gene1.p01 Protein 2e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein U95364.1.gene1.p01 Protein 3e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein HM776707.1.gene1.p1 Protein 6e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein X92507.1.gene1.p01 Protein 6e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ408762.1.gene1.p1 Protein 8e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AJ567481.1.gene1.p01 Protein 4e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EF374097.1.gene1.p01 Protein 7e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AJ005045.gene.p01 Protein 7e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein GQ149244.1.gene1.p01 Protein 6e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ125241.gene.p01 Protein 6e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AJ416344.1.gene1.p01 Protein 1e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein GU127598.1.gene1.p1 Protein 6e-39 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AB205197.1.gene1.p01 Protein 3e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY649755.1.gene1.p01 Protein 2e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY750914.gene.p01 Protein 3e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EU177100.1.gene1.p01 Protein 2e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EU202673.2.gene1.p2 Protein 3e-40 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF189721.1.gene1.p01 Protein 1e-38 43
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AB177384.1.gene1.p01 Protein 2e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF305837.gene.p01 Protein 2e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY847148.1.gene1.p01 Protein 3e-39 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY598759.gene.p01 Protein 2e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY292654.1.gene1.p1 Protein 2e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY515297.1.gene1.p1 Protein 3e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein JF966749.1.gene1.p01 Protein 5e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ815436.1.gene1.p01 Protein 3e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ223685.1.gene1.p01 Protein 3e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF255298.1.gene1.p1 Protein 2e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AM411407.1.gene1.p01 Protein 4e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AM982522.2.gene1.p01 Protein 1e-37 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein DQ256091.1.gene1.p1 Protein 3e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein Y10278.1.gene1.p01 Protein 2e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein EF219142.1.gene1.p01 Protein 3e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein X92506.gene.p01 Protein 5e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY080894.1.gene1.p01 Protein 3e-40 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein Y14156.1.gene1.p01 Protein 1e-37 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AY178993.1.gene1.p01 Protein 2e-37 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF135373.1.gene1.p01 Protein 2e-37 42
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein AF367983.gene.p01 Protein 6e-38 41
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein GQ140348.1.gene1.p01 Protein 4e-39 41
RHA1_ro00177 YP_700171.1 beta-lactamase, penicillin binding protein FJ234412.1.gene1.p01 Protein 3e-39 41